RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 C11orf87Q6NUJ2 197 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 NFRKBQ6P4R8 1299 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 TTC33Q6PID6 262 aaPredicted RBP1.4□□□□□ -2.18
XRN1-214ENST00000498077 NCEH1Q6PIU2 408 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 SFTA2Q6UW10 78 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 ABHD12BQ7Z5M8 362 aaPredicted RBP1.4□□□□□ -2.18
XRN1-214ENST00000498077 KBTBD6Q86V97 674 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 ZNF227Q86WZ6 799 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 GKN2Q86XP6 184 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 TBC1D21Q8IYX1 336 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 PYROXD2Q8N2H3 581 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 SLC15A4Q8N697 577 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 BEND2Q8NDZ0 799 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 NUP37Q8NFH4 326 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 OR4N2Q8NGD1 307 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.4□□□□□ -2.18
XRN1-214ENST00000498077 TSPEARQ8WU66 669 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 HMGB4Q8WW32 186 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 ATP6V0A1Q93050 837 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 RCN3Q96D15 328 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 CEP19Q96LK0 163 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 Q96MT0 163 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 ZNF75AQ96N20 296 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 C11orf84Q9BUA3 381 aaPredicted RBP1.4□□□□□ -2.18
XRN1-214ENST00000498077 ZNF747Q9BV97 191 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 C6orf62Q9GZU0 229 aaPredicted RBP1.4□□□□□ -2.18
XRN1-214ENST00000498077 WWP1Q9H0M0 922 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 AP5M1Q9H0R1 490 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 NUP62CLQ9H1M0 184 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 ALG13Q9NP73 1137 aaKnown RBP1.4□□□□□ -2.18
XRN1-214ENST00000498077 RPS10P5Q9NQ39 176 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 TMEM184CQ9NVA4 438 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 ELOVL5Q9NYP7 299 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 C19orf25Q9UFG5 118 aaPredicted RBP1.4□□□□□ -2.18
XRN1-214ENST00000498077 SUFUQ9UMX1 484 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 KLHDC2Q9Y2U9 406 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 TIMM8BQ9Y5J9 83 aaPredicted RBP1.4□□□□□ -2.18
XRN1-214ENST00000498077 ALG5Q9Y673 324 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 R4GN57 208 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 F5P12259 2224 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 CCDC88AQ3V6T2 1871 aa1.4□□□□□ -2.18
XRN1-214ENST00000498077 KAT6BQ8WYB5 2073 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 A0A0G2JLW4 131 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 DPRXA6NFQ7 191 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 INPP4BO15327 924 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 NOBOXO60393 691 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 DNAJC6O75061 913 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 UFL1O94874 794 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 PARNO95453 639 aaKnown RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 GSRP00390 522 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 HPRP00739 348 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 ADRA2AP08913 450 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 PNLIPP16233 465 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 CHMP24386 653 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 MLH1P40692 756 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 KCNC1P48547 511 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 CCR6P51684 374 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 KRTAP10-7P60409 375 aaPredicted RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 RAB5BP61020 215 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 TXNL4AP83876 142 aaKnown RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 CDC42EP1Q00587 391 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 ECT2LQ008S8 904 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 SLC7A5Q01650 507 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 TNK2Q07912 1038 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 PLD1Q13393 1074 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 USP10Q14694 798 aaKnown RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 KCNJ8Q15842 424 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 GSG1Q2KHT4 349 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 FAM76BQ5HYJ3 339 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 PLCXD3Q63HM9 321 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 NXNQ6DKJ4 435 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 REG3GQ6UW15 175 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 USP45Q70EL2 814 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 CLNKQ7Z7G1 428 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 AKAP14Q86UN6 197 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 KRT73Q86Y46 540 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 LAS2Q8IYD9 372 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 CNBD1Q8NA66 436 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 ZNF540Q8NDQ6 660 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 OR6J1Q8NGC5 347 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 OR4C3Q8NH37 302 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 CDC26Q8NHZ8 85 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 RASGRP4Q8TDF6 673 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 ST8SIA4Q92187 359 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 KAT2BQ92831 832 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 KIFAP3Q92845 792 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 DNAJC19Q96DA6 116 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 PIK3IP1Q96FE7 263 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 ADAD1Q96M93 576 aaKnown RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 FAM20AQ96MK3 541 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 TRIM51Q9BSJ1 452 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 TIMM21Q9BVV7 248 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 HEMGNQ9BXL5 484 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 NUSAP1Q9BXS6 441 aaKnown RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 UGT2B28Q9BY64 529 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 PUS3Q9BZE2 481 aaKnown RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 UCK2Q9BZX2 261 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 ZNF350Q9GZX5 532 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 ATG5Q9H1Y0 275 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 UGT1A7Q9HAW7 530 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms