RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 GCNT6Q5T4J0 391 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 TMEM198Q66K66 360 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 ADALQ6DHV7 355 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 FAM180BQ6P0A1 224 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 PPFIBP2Q8ND30 876 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 C1orf131Q8NDD1 294 aaKnown RBP3.15□□□□□ -1.91
SMC4-227ENST00000497984 OR5AP2Q8NGF4 316 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 LRRC59Q96AG4 307 aaKnown RBP3.15□□□□□ -1.91
SMC4-227ENST00000497984 DDOQ99489 341 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 WWTR1Q9GZV5 400 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 SYNCQ9H7C4 482 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 ATP13A3Q9H7F0 1226 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 DNAJC18Q9H819 358 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 SEPT11Q9NVA2 429 aaKnown RBP3.15□□□□□ -1.91
SMC4-227ENST00000497984 PAG1Q9NWQ8 432 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 NUDT4Q9NZJ9 180 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 MAN1B1Q9UKM7 699 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 RARRES3Q9UL19 164 aa3.15□□□□□ -1.91
SMC4-227ENST00000497984 LAS1LQ9Y4W2 734 aaKnown RBP3.15□□□□□ -1.91
SMC4-227ENST00000497984 MED19A0JLT2 244 aaPredicted RBP3.14□□□□□ -1.91
SMC4-227ENST00000497984 KLLNB2CW77 178 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 NXPH2O95156 264 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 PIGNO95427 931 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 TNFAIP3P21580 790 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 RBMS1P29558 406 aaKnown RBP3.14□□□□□ -1.91
SMC4-227ENST00000497984 MAPK4P31152 587 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 PSMC4P43686 418 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 GSDMDP57764 484 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 SNRPEP62304 92 aaKnown RBP3.14□□□□□ -1.91
SMC4-227ENST00000497984 CXCL9Q07325 125 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 HLA-BQ31612 363 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 PLEKHS1Q5SXH7 462 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 CCDC30Q5VVM6 783 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 FIP1L1Q6UN15 594 aaKnown RBP3.14□□□□□ -1.91
SMC4-227ENST00000497984 C1orf122Q6ZSJ8 110 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 TBC1D1Q86TI0 1168 aaPredicted RBP3.14□□□□□ -1.91
SMC4-227ENST00000497984 LACC1Q8IV20 430 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 RPAP2Q8IXW5 612 aaPredicted RBP3.14□□□□□ -1.91
SMC4-227ENST00000497984 SLC39A11Q8N1S5 342 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 TTC39CQ8N584 583 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 RASL10AQ92737 203 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 DAZLQ92904 295 aaKnown RBP3.14□□□□□ -1.91
SMC4-227ENST00000497984 SGK494Q96LW2 274 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 CEP295NLQ96MC4 621 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 HHATLQ9HCP6 504 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 WDR37Q9Y2I8 494 aa3.14□□□□□ -1.91
SMC4-227ENST00000497984 LOC101059948A0A1B0GTJ6 334 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 LNP1A1A4G5 178 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 ELOVL7A1L3X0 281 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 LRRC72A6NJI9 287 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 ZBED4O75132 1171 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 CLTBP09497 229 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 CAPN3P20807 821 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 GARSP41250 739 aaKnown RBP3.13□□□□□ -1.91
SMC4-227ENST00000497984 ARSEP51690 589 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 SIRPAP78324 504 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 MELKQ14680 651 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 C4orf50Q6ZRC1 276 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 ADIPOR2Q86V24 386 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 MARVELD2Q8N4S9 558 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 PAPD5Q8NDF8 572 aaKnown RBP3.13□□□□□ -1.91
SMC4-227ENST00000497984 ZPLD1Q8TCW7 415 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 AZIN2Q96A70 460 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 SKA1Q96BD8 255 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 NSL1Q96IY1 281 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 TIGD1Q96MW7 591 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 USP28Q96RU2 1077 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 RTN4RQ9BZR6 473 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 HRH4Q9H3N8 390 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 SMARCAD1Q9H4L7 1026 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 SEC63Q9UGP8 760 aaKnown RBP3.13□□□□□ -1.91
SMC4-227ENST00000497984 PNMA2Q9UL42 364 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 RIPK3Q9Y572 518 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 SPIN1Q9Y657 262 aaPredicted RBP3.13□□□□□ -1.91
SMC4-227ENST00000497984 ZNF541Q9H0D2 1346 aa3.13□□□□□ -1.91
SMC4-227ENST00000497984 A0A1W2PN81 502 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 A0A1W2PRB8 838 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 E9PI62 339 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 VILLO15195 856 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 RSL1D1O76021 490 aaKnown RBP3.12□□□□□ -1.91
SMC4-227ENST00000497984 IGKV3-15P01624 115 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 IGHV3-13P01766 116 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 CA4P22748 312 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 PAX3P23760 479 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 NMBRP28336 390 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 CHRNA7P36544 502 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 OPRL1P41146 370 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 PNLIPRP2P54317 469 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 NAP1L1P55209 391 aaKnown RBP3.12□□□□□ -1.91
SMC4-227ENST00000497984 HUNKP57058 714 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 B3GALT5-AS1P59052 145 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 TRA2BP62995 288 aaKnown RBP3.12□□□□□ -1.91
SMC4-227ENST00000497984 NR1D2Q14995 579 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 E2F5Q15329 346 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 CLEC17AQ6ZS10 378 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 INTS8Q75QN2 995 aaKnown RBP3.12□□□□□ -1.91
SMC4-227ENST00000497984 HPS6Q86YV9 775 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 CPSF7Q8N684 471 aaKnown RBP3.12□□□□□ -1.91
SMC4-227ENST00000497984 MAPKAPK5-AS1Q8N8E1 139 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 TBC1D16Q8TBP0 767 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms