RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 LUC7L2Q9Y383 392 aaKnown RBP15.87■□□□□ 0.13
VIM-208ENST00000497849 HEBP2Q9Y5Z4 205 aa15.87■□□□□ 0.13
VIM-208ENST00000497849 C2orf74A8MZ97 194 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 BUD23O43709 281 aaKnown RBP15.86■□□□□ 0.13
VIM-208ENST00000497849 PMPCBO75439 489 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 UNC5CO95185 931 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 MSH3P20585 1137 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 ITGAXP20702 1163 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 AKT1P31749 480 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 GJC1P36383 396 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 PRKCIP41743 596 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 SSR1P43307 286 aaKnown RBP15.86■□□□□ 0.13
VIM-208ENST00000497849 KIR3DL1P43629 444 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 ADORA2A-AS1P86434 159 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 ZBED6P86452 979 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 TMPRSS15P98073 1019 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 SRSF11Q05519 484 aaKnown RBP15.86■□□□□ 0.13
VIM-208ENST00000497849 ITGA9Q13797 1035 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 BCL7AQ4VC05 210 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 CCDC70Q6NSX1 233 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 MTFR2Q6P444 385 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 XKRXQ6PP77 449 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 SPESP1Q6UW49 350 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 TMEM207Q6UWW9 146 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 TRIM73Q86UV7 250 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 C14orf79Q96F83 325 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 THOC3Q96J01 351 aaKnown RBP15.86■□□□□ 0.13
VIM-208ENST00000497849 FERD3LQ96RJ6 166 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 LMF1Q96S06 567 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 SPSB2Q99619 263 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 TRABDQ9H4I3 376 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 XKR8Q9H6D3 395 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 TXLNGQ9NUQ3 528 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 UBP1Q9NZI7 540 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.86■□□□□ 0.13
VIM-208ENST00000497849 SH3BGRL2Q9UJC5 107 aa15.86■□□□□ 0.13
VIM-208ENST00000497849 KLHL33A6NCF5 533 aa15.85■□□□□ 0.13
VIM-208ENST00000497849 MST1P26927 711 aa15.85■□□□□ 0.13
VIM-208ENST00000497849 GCGRP47871 477 aa15.85■□□□□ 0.13
VIM-208ENST00000497849 AP1B1Q10567 949 aa15.85■□□□□ 0.13
VIM-208ENST00000497849 PDK2Q15119 407 aa15.85■□□□□ 0.13
VIM-208ENST00000497849 HADHQ16836 314 aaKnown RBP15.85■□□□□ 0.13
VIM-208ENST00000497849 TLDC1Q6P9B6 456 aa15.85■□□□□ 0.13
VIM-208ENST00000497849 AMIGO1Q86WK6 493 aa15.85■□□□□ 0.13
VIM-208ENST00000497849 PLD5Q8N7P1 536 aa15.85■□□□□ 0.13
VIM-208ENST00000497849 RBM41Q96IZ5 413 aaKnown RBP15.85■□□□□ 0.13
VIM-208ENST00000497849 CCM2Q9BSQ5 444 aa15.85■□□□□ 0.13
VIM-208ENST00000497849 CHRNA10Q9GZZ6 450 aa15.85■□□□□ 0.13
VIM-208ENST00000497849 THAP2Q9H0W7 228 aa15.85■□□□□ 0.13
VIM-208ENST00000497849 AIPL1Q9NZN9 384 aa15.85■□□□□ 0.13
VIM-208ENST00000497849 LOC285095A0A1B0GVY8 99 aa15.84■□□□□ 0.13
VIM-208ENST00000497849 CHRNA4P43681 627 aa15.84■□□□□ 0.13
VIM-208ENST00000497849 TAS2R40P59535 323 aa15.84■□□□□ 0.13
VIM-208ENST00000497849 PTPRCAPQ14761 206 aa15.84■□□□□ 0.13
VIM-208ENST00000497849 NKG7Q16617 165 aa15.84■□□□□ 0.13
VIM-208ENST00000497849 TUBB8Q3ZCM7 444 aa15.84■□□□□ 0.13
VIM-208ENST00000497849 MMP21Q8N119 569 aa15.84■□□□□ 0.13
VIM-208ENST00000497849 PHC3Q8NDX5 983 aa15.84■□□□□ 0.13
VIM-208ENST00000497849 OR11G2Q8NGC1 345 aa15.84■□□□□ 0.13
VIM-208ENST00000497849 ZNF398Q8TD17 642 aa15.84■□□□□ 0.13
VIM-208ENST00000497849 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.84■□□□□ 0.13
VIM-208ENST00000497849 ZNF830Q96NB3 372 aaPredicted RBP15.84■□□□□ 0.13
VIM-208ENST00000497849 MESP1Q9BRJ9 268 aa15.84■□□□□ 0.13
VIM-208ENST00000497849 OR52A5Q9H2C5 316 aa15.84■□□□□ 0.13
VIM-208ENST00000497849 GLOD4Q9HC38 313 aa15.84■□□□□ 0.13
VIM-208ENST00000497849 A0A1B0GTL3 188 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 AKR1B15C9JRZ8 316 aaPredicted RBP15.83■□□□□ 0.12
VIM-208ENST00000497849 ONECUT2O95948 504 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 PYGMP11217 842 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 UGT2B7P16662 529 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 AGAP20933 346 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 TNFSF10P50591 281 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 ARG2P78540 354 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 KLHL30Q0D2K2 578 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 INAQ16352 499 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 SIRPB2Q5JXA9 342 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 SHISA6Q6ZSJ9 500 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 COX15Q7KZN9 410 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 OVCH1Q7RTY7 1134 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 MAP7D3Q8IWC1 876 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 DNAJC22Q8N4W6 341 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 FLVCR1-AS1Q8TAF5 88 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 HM13Q8TCT9 377 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 FKBP10Q96AY3 582 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 MTFMTQ96DP5 389 aaKnown RBP15.83■□□□□ 0.12
VIM-208ENST00000497849 RNF157Q96PX1 679 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 OR2A14Q96R47 310 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 NDC1Q9BTX1 674 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 WDR54Q9H977 334 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 MCCC2Q9HCC0 563 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 PLA2G3Q9NZ20 509 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 ICKQ9UPZ9 632 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 HEY1Q9Y5J3 304 aa15.83■□□□□ 0.12
VIM-208ENST00000497849 MYO1FO00160 1098 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 MFAP3LO75121 409 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 WISP2O76076 250 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 PRAMEF1O95521 474 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 ALBP02768 609 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 ALAS2P22557 587 aa15.82■□□□□ 0.12
VIM-208ENST00000497849 TLE4Q04727 773 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms