RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 ZBTB8BQ8NAP8 495 aaPredicted RBP2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 KDM1BQ8NB78 822 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 PAPD5Q8NDF8 572 aaKnown RBP2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 MCUQ8NE86 351 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 DNAAF1Q8NEP3 725 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 VN1R2Q8NFZ6 395 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 TMEM163Q8TC26 289 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 Q8TCH9 128 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 FAM151AQ8WW52 585 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 XAGE5Q8WWM1 108 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 MRPS27Q92552 414 aaKnown RBP2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 EXT2Q93063 718 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 TEKT1Q969V4 418 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 MIB2Q96AX9 1013 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 SPACA9Q96E40 222 aaPredicted RBP2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 ADAD1Q96M93 576 aaKnown RBP2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 COQ10AQ96MF6 247 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 WWC2-AS2Q96NR7 200 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 MUS81Q96NY9 551 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 GNRHR2Q96P88 292 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 MYCBPQ99417 103 aaPredicted RBP2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 MXRA8Q9BRK3 442 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 ABHD14AQ9BUJ0 271 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 TRIM7Q9C029 511 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 TRIM2Q9C040 744 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 TKTL2Q9H0I9 626 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 TMEM206Q9H813 350 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 LMAN1LQ9HAT1 526 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 USP29Q9HBJ7 922 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 DDX4Q9NQI0 724 aaKnown RBP2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 DNAJC17Q9NVM6 304 aaKnown RBP2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 ASNSD1Q9NWL6 643 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 SYBUQ9NX95 663 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 ANKRD10Q9NXR5 420 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 MIS18AQ9NYP9 233 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 ERAP1Q9NZ08 941 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 HMG20BQ9P0W2 317 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 TRIM10Q9UDY6 481 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 ACSL5Q9ULC5 683 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 FAM96BQ9Y3D0 163 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 NFE2L3Q9Y4A8 694 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 WNT6Q9Y6F9 365 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 A3GALT2U3KPV4 340 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 KNTC1P50748 2209 aa2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 MAP1AP78559 2803 aaPredicted RBP2.43□□□□□ -2.02
CKS1BP2-201ENST00000497342 PLXNB3Q9ULL4 1909 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 MXRA5Q9NR99 2828 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 WNK1Q9H4A3 2382 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 RNF103-CHMP3A0A140T963 221 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 KANSL1LA0AUZ9 987 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 TARSL2A2RTX5 802 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 TRIM64CA6NLI5 447 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 RNF103O00237 685 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 ANGPT2O15123 496 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 CTAGE5O15320 804 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 TXNL1O43396 289 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 NARSO43776 548 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 DUSP11O75319 330 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 TADA2AO75478 443 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 NKX2-2O95096 273 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 SCAF4O95104 1147 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 TRUB2O95900 331 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 SLC16A8O95907 504 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 SLC4A1P02730 911 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 CHRM5P08912 532 aaPredicted RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 LINC00271P0C7V0 271 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 UNGP13051 313 aaPredicted RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 WT1P19544 449 aaPredicted RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 ANXA7P20073 488 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 CCNA2P20248 432 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 EDN2P20800 178 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 MAOAP21397 527 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 UBA1P22314 1058 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 FPR3P25089 353 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 HPDP32754 393 aaPredicted RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 ACAA2P42765 397 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 HTR6P50406 440 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 ZNF81P51508 661 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 CLCNKBP51801 687 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 MRPS35P82673 323 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 RBPJQ06330 500 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 FAM27E3Q08E93 113 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 NPRL3Q12980 569 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 GAGE2BQ13066 116 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 CBX3Q13185 183 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 GAMTQ14353 236 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 MVPQ14764 893 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 NR1D2Q14995 579 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 SNAPC1Q16533 368 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 VWC2Q2TAL6 325 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 WSCD2Q2TBF2 565 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 ZSCAN23Q3MJ62 389 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 ANXA2RQ3ZCQ2 193 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 AARDQ4LEZ3 155 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 GAGE2EQ4V326 116 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 SYTL3Q4VX76 610 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 DNTTIP2Q5QJE6 756 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 SFMBT2Q5VUG0 894 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 SHEQ5VZ18 495 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 TXNRD3NBQ6F5E7 133 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms