RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 STIP1P31948 543 aaKnown RBP12.53□□□□□ -0.4
FN1-226ENST00000496542 SHMT2P34897 504 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 FDFT1P37268 417 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 GRIA1P42261 906 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 PGDP52209 483 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 OASLQ15646 514 aaKnown RBP12.53□□□□□ -0.4
FN1-226ENST00000496542 DEFB110Q30KQ9 67 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 TSTD2Q5T7W7 516 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 AFTPHQ6ULP2 937 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 UNC5AQ6ZN44 842 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 PRUNE1Q86TP1 453 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 RNF10Q8N5U6 811 aaKnown RBP12.53□□□□□ -0.4
FN1-226ENST00000496542 C19orf47Q8N9M1 422 aaKnown RBP12.53□□□□□ -0.4
FN1-226ENST00000496542 OR6P1Q8NGX9 317 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 SLC25A23Q9BV35 468 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 NLNQ9BYT8 704 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 ING2Q9H160 280 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 SERTAD3Q9UJW9 196 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 GUCA1BQ9UMX6 200 aa12.53□□□□□ -0.4
FN1-226ENST00000496542 ANKRD12Q6UB98 2062 aa12.52□□□□□ -0.4
FN1-226ENST00000496542 SLC5A10A0PJK1 596 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 CYSRT1A8MQ03 144 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 C9J4A7 227 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 BHMG1C9JSJ3 638 aaPredicted RBP12.52□□□□□ -0.41
FN1-226ENST00000496542 ZNF749O43361 778 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 SUN1O94901 812 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 CHRM5P08912 532 aaPredicted RBP12.52□□□□□ -0.41
FN1-226ENST00000496542 MSL3P1P0C860 447 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 ACADLP28330 430 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 CCL11P51671 97 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 MLLT10P55197 1068 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 LYPLAL1Q5VWZ2 237 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 SLC13A5Q86YT5 568 aaPredicted RBP12.52□□□□□ -0.41
FN1-226ENST00000496542 TBC1D21Q8IYX1 336 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 GPR135Q8IZ08 494 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 CCDC89Q8N998 374 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 OR5K2Q8NHB8 316 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 ZNF778Q96MU6 729 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 OR2A14Q96R47 310 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 TTC1Q99614 292 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 FRMD8P1Q9BZ68 369 aaPredicted RBP12.52□□□□□ -0.41
FN1-226ENST00000496542 TSGA10Q9BZW7 698 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 FAM60AQ9NP50 221 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 RAB6BQ9NRW1 208 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 SPHK1Q9NYA1 384 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 POLG2Q9UHN1 485 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 TCFL5Q9UL49 500 aa12.52□□□□□ -0.41
FN1-226ENST00000496542 CNTRLQ7Z7A1 2325 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 A0A0J9YY10 115 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 GOLGA6L6A8MZA4 724 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 F8W8V4 182 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 OR2B3O76000 313 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 CAPN1P07384 714 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 APRTP07741 180 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 HBQ1P09105 142 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 ADRA1DP25100 572 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 PRAMEP78395 509 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 PLOD1Q02809 727 aaPredicted RBP12.51□□□□□ -0.41
FN1-226ENST00000496542 SEMA3AQ14563 771 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 ESPL1Q14674 2120 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 NCF4Q15080 339 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 ZIC1Q15915 447 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 FASTKD1Q53R41 847 aaKnown RBP12.51□□□□□ -0.41
FN1-226ENST00000496542 C1orf189Q5VU69 101 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 ZNF534Q76KX8 674 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 GLIS1Q8NBF1 620 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 PPHLN1Q8NEY8 458 aaKnown RBP12.51□□□□□ -0.41
FN1-226ENST00000496542 OR4L1Q8NH43 312 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 ADAMTS17Q8TE56 1095 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 MIB2Q96AX9 1013 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 TCTN2Q96GX1 697 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 RANBP9Q96S59 729 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 CASS4Q9NQ75 786 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 IRAK4Q9NWZ3 460 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 OR6C2Q9NZP2 312 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 TCAF1Q9Y4C2 921 aa12.51□□□□□ -0.41
FN1-226ENST00000496542 ICE1Q9Y2F5 2266 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 ISM1B1AKI9 464 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 HCRTR1O43613 425 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 KRT86O43790 486 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 KDM1AO60341 852 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 TMEM63AO94886 807 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 ZSCAN5DPP0CG00 497 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 TPBGLP0DKB5 382 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 AGXTP21549 392 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 CCR7P32248 378 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 SESN2P58004 480 aaPredicted RBP12.5□□□□□ -0.41
FN1-226ENST00000496542 HSPA14Q0VDF9 509 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 ATP1A4Q13733 1029 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 UBAP2LQ14157 1087 aaKnown RBP12.5□□□□□ -0.41
FN1-226ENST00000496542 RPS6KA1Q15418 735 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 DNAJC21Q5F1R6 531 aaKnown RBP12.5□□□□□ -0.41
FN1-226ENST00000496542 NLRP9Q7RTR0 991 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 LDB1Q86U70 411 aaPredicted RBP12.5□□□□□ -0.41
FN1-226ENST00000496542 ATCAYQ86WG3 371 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 CFAP61Q8NHU2 1237 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 FLVCR1-AS1Q8TAF5 88 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 LKAAEAR1Q8TD35 194 aa12.5□□□□□ -0.41
FN1-226ENST00000496542 DPH2Q9BQC3 489 aaPredicted RBP12.5□□□□□ -0.41
FN1-226ENST00000496542 TSSK1BQ9BXA7 367 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms