RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.83□□□□□ -0.68
CMSS1-208ENST00000496116 GGTA1PQ4G0N0 100 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 FAM98BQ52LJ0 330 aaKnown RBP10.83□□□□□ -0.68
CMSS1-208ENST00000496116 ARHGAP15Q53QZ3 475 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 SGO1Q5FBB7 561 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 PLEKHS1Q5SXH7 462 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 BORAQ6PGQ7 559 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 ELMSAN1Q6PJG2 1045 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 BRAT1Q6PJG6 821 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 RALGPS2Q86X27 583 aaPredicted RBP10.83□□□□□ -0.68
CMSS1-208ENST00000496116 TMEM25Q86YD3 366 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 DNAJB8Q8NHS0 232 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 ITFG1Q8TB96 612 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 MAGEB10Q96LZ2 347 aaPredicted RBP10.83□□□□□ -0.68
CMSS1-208ENST00000496116 RNF145Q96MT1 663 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 CHID1Q9BWS9 393 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 ABCG8Q9H221 673 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 OLAHQ9NV23 265 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 CCL26Q9Y258 94 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 ACOX3O15254 700 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 ETS2P15036 469 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 ZNF23P17027 643 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 GGT1P19440 569 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 MYF6P23409 242 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 GBX1Q14549 363 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 CPSF6Q16630 551 aaKnown RBP eCLIP10.82□□□□□ -0.68
CMSS1-208ENST00000496116 SLC36A3Q495N2 470 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 Q6ZVU0 165 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 PLPP6Q8IY26 295 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 KLHL23Q8NBE8 558 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 OR2T12Q8NG77 320 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 SLC22A17Q8WUG5 538 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 SELENOMQ8WWX9 145 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 GTF2H4Q92759 462 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 IRF7Q92985 503 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 NMD3Q96D46 503 aaKnown RBP10.82□□□□□ -0.68
CMSS1-208ENST00000496116 VPS50Q96JG6 964 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 CCDC115Q96NT0 180 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 THUMPD3Q9BV44 507 aaKnown RBP10.82□□□□□ -0.68
CMSS1-208ENST00000496116 UGT2B28Q9BY64 529 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 OSBPL6Q9BZF3 934 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 ELOVL6Q9H5J4 265 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 CLMPQ9H6B4 373 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 SMOXQ9NWM0 555 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 SMPD3Q9NY59 655 aaPredicted RBP10.82□□□□□ -0.68
CMSS1-208ENST00000496116 PTTG2Q9NZH5 202 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 VAPAQ9P0L0 249 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.82□□□□□ -0.68
CMSS1-208ENST00000496116 SLCO3A1Q9UIG8 710 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 USP22Q9UPT9 525 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 MYOFQ9NZM1 2061 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 WASH3PC4AMC7 463 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 DLGAP1O14490 977 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 NRG2O14511 850 aaPredicted RBP10.82□□□□□ -0.68
CMSS1-208ENST00000496116 EI24O14681 340 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 GSTA4O15217 222 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 DEAF1O75398 565 aaPredicted RBP10.82□□□□□ -0.68
CMSS1-208ENST00000496116 RAP2AP10114 183 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 ACRP10323 421 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 CALRP27797 417 aaKnown RBP10.82□□□□□ -0.68
CMSS1-208ENST00000496116 MAPK1P28482 360 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 NNMTP40261 264 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 CCR2P41597 374 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 AP1S2P56377 157 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 PLIN5Q00G26 463 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 CHRNB3Q05901 458 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 CYP4F3Q08477 520 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 BOP1Q14137 746 aaKnown RBP10.82□□□□□ -0.68
CMSS1-208ENST00000496116 SELPLGQ14242 412 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 AAK1Q2M2I8 961 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 USP39Q53GS9 565 aaKnown RBP10.82□□□□□ -0.68
CMSS1-208ENST00000496116 SPANXN4Q5MJ08 99 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 TTC33Q6PID6 262 aaPredicted RBP10.82□□□□□ -0.68
CMSS1-208ENST00000496116 DET1Q7L5Y6 550 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 DTWD1Q8N5C7 304 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 LEMD2Q8NC56 503 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 ZFP28Q8NHY6 868 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 MCOLN3Q8TDD5 553 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 ASB11Q8WXH4 323 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 MTFMTQ96DP5 389 aaKnown RBP10.82□□□□□ -0.68
CMSS1-208ENST00000496116 SH3GL3Q99963 347 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 TCF25Q9BQ70 676 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 GORASP2Q9H8Y8 452 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 RAD18Q9NS91 495 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 TDP1Q9NUW8 608 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 TBC1D14Q9P2M4 693 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 ZNHIT2Q9UHR6 403 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 CD84Q9UIB8 345 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 TMED5Q9Y3A6 229 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 V9GYQ6 96 aa10.82□□□□□ -0.68
CMSS1-208ENST00000496116 VILLO15195 856 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 CLOCKO15516 846 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 PDYNP01213 254 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 PRPS2P11908 318 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 TYRP14679 529 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 ITGB8P26012 769 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 RPS9P46781 194 aaKnown RBP10.81□□□□□ -0.68
CMSS1-208ENST00000496116 RPS14P62263 151 aaKnown RBP10.81□□□□□ -0.68
CMSS1-208ENST00000496116 LSAMPQ13449 338 aa10.81□□□□□ -0.68
CMSS1-208ENST00000496116 KCTD21Q4G0X4 260 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms