RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 CNOT3O75175 753 aaKnown RBP16.93■□□□□ 0.3
TMEM53-209ENST00000495630 ZRANB2O95218 330 aaKnown RBP eCLIP16.93■□□□□ 0.3
TMEM53-209ENST00000495630 UMODP07911 640 aa16.93■□□□□ 0.3
TMEM53-209ENST00000495630 SHMT2P34897 504 aa16.93■□□□□ 0.3
TMEM53-209ENST00000495630 ZIC1Q15915 447 aa16.93■□□□□ 0.3
TMEM53-209ENST00000495630 ITPRIPL1Q6GPH6 555 aa16.93■□□□□ 0.3
TMEM53-209ENST00000495630 CAVIN1Q6NZI2 390 aaKnown RBP16.93■□□□□ 0.3
TMEM53-209ENST00000495630 IGFL2Q6UWQ7 119 aa16.93■□□□□ 0.3
TMEM53-209ENST00000495630 UNC5AQ6ZN44 842 aa16.93■□□□□ 0.3
TMEM53-209ENST00000495630 RCOR2Q8IZ40 523 aa16.93■□□□□ 0.3
TMEM53-209ENST00000495630 OR13C4Q8NGS5 318 aa16.93■□□□□ 0.3
TMEM53-209ENST00000495630 PPP4R1Q8TF05 950 aa16.93■□□□□ 0.3
TMEM53-209ENST00000495630 WDR77Q9BQA1 342 aaPredicted RBP16.93■□□□□ 0.3
TMEM53-209ENST00000495630 HGH1Q9BTY7 390 aa16.93■□□□□ 0.3
TMEM53-209ENST00000495630 DHCR7Q9UBM7 475 aaKnown RBP16.93■□□□□ 0.3
TMEM53-209ENST00000495630 ICKQ9UPZ9 632 aa16.93■□□□□ 0.3
TMEM53-209ENST00000495630 GOLGA6L19H0YKK7 550 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 MASP2O00187 686 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 PSTPIP1O43586 416 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 HCRTR1O43613 425 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 UGT2B7P16662 529 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 ITGA3P26006 1051 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 ZRSR2Q15696 482 aaKnown RBP16.92■□□□□ 0.3
TMEM53-209ENST00000495630 SP5Q6BEB4 398 aaPredicted RBP16.92■□□□□ 0.3
TMEM53-209ENST00000495630 TRIM73Q86UV7 250 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 DNAJC22Q8N4W6 341 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 ZNF655Q8N720 491 aaPredicted RBP16.92■□□□□ 0.3
TMEM53-209ENST00000495630 MARVELD3Q96A59 401 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 MOCOSQ96EN8 888 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 CCDC42Q96M95 316 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 FERMT1Q9BQL6 677 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 GORASP1Q9BQQ3 440 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 NDC1Q9BTX1 674 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 OR6C2Q9NZP2 312 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 POLG2Q9UHN1 485 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 INTUQ9ULD6 942 aa16.92■□□□□ 0.3
TMEM53-209ENST00000495630 hCG_1818297A0A087WSY0 165 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 TRBV5-4A0A0C4DH59 114 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 CHRM5P08912 532 aaPredicted RBP16.91■□□□□ 0.3
TMEM53-209ENST00000495630 EDN3P14138 238 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 MMP11P24347 488 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 RBL1P28749 1068 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 TSFMP43897 325 aaKnown RBP16.91■□□□□ 0.3
TMEM53-209ENST00000495630 ZNF140P52738 457 aaPredicted RBP16.91■□□□□ 0.3
TMEM53-209ENST00000495630 TMPRSS15P98073 1019 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 PRPSAP1Q14558 356 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 HIF1AQ16665 826 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 AGAP7PQ5VUJ5 663 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 PRAMEF13Q5VWM6 474 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 KATNAL2Q8IYT4 538 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 DNAJB14Q8TBM8 379 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 GRHL3Q8TE85 626 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 DENND1AQ8TEH3 1009 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 FAR1Q8WVX9 515 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 HAUS1Q96CS2 278 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 AGAP4Q96P64 663 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 PHF12Q96QT6 1004 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 CHP1Q99653 195 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 APOL2Q9BQE5 337 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 ARNT2Q9HBZ2 717 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 FEZ2Q9UHY8 353 aaPredicted RBP16.91■□□□□ 0.3
TMEM53-209ENST00000495630 NOVA2Q9UNW9 492 aaKnown RBP16.91■□□□□ 0.3
TMEM53-209ENST00000495630 PLCL2Q9UPR0 1127 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 OSGIN2Q9Y236 505 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 ALG6Q9Y672 507 aa16.91■□□□□ 0.3
TMEM53-209ENST00000495630 A0A0J9YY10 115 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 H7C0C1 242 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 LIN7AO14910 233 aaPredicted RBP16.9■□□□□ 0.3
TMEM53-209ENST00000495630 AP2A2O94973 939 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 ONECUT2O95948 504 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 ALBP02768 609 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 TPM3P06753 285 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 CTSBP07858 339 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 PIM1P11309 404 aaPredicted RBP16.9■□□□□ 0.3
TMEM53-209ENST00000495630 ALAS2P22557 587 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 ACRV1P26436 265 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 ATP5OP48047 213 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 CDKN1CP49918 316 aaPredicted RBP16.9■□□□□ 0.3
TMEM53-209ENST00000495630 TRIM14Q14142 442 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 NAA30Q147X3 362 aaPredicted RBP16.9■□□□□ 0.3
TMEM53-209ENST00000495630 SLC9A5Q14940 896 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 DEFB110Q30KQ9 67 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 B3GNTL1Q67FW5 361 aaPredicted RBP16.9■□□□□ 0.3
TMEM53-209ENST00000495630 BBS12Q6ZW61 710 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 OVCH1Q7RTY7 1134 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 SERPINA9Q86WD7 417 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 TBC1D21Q8IYX1 336 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 OR5AR1Q8NGP9 310 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 FLVCR1-AS1Q8TAF5 88 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 RUBCNLQ9H714 662 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 NHEJ1Q9H9Q4 299 aaPredicted RBP16.9■□□□□ 0.3
TMEM53-209ENST00000495630 SLC22A11Q9NSA0 550 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 SPTLC3Q9NUV7 552 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 IRAK4Q9NWZ3 460 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 SPHK1Q9NYA1 384 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 FBXL4Q9UKA2 621 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 ASF1AQ9Y294 204 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 CSAG2Q9Y5P2 127 aa16.9■□□□□ 0.3
TMEM53-209ENST00000495630 MDC1Q14676 2089 aaKnown RBP16.89■□□□□ 0.29
TMEM53-209ENST00000495630 A0A1B0GUH1 482 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms