RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 CCR10P46092 362 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 FNTBP49356 437 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 RPS14P62263 151 aaKnown RBP10.03□□□□□ -0.8
HDAC3-214ENST00000495485 RPS21P63220 83 aaKnown RBP10.03□□□□□ -0.8
HDAC3-214ENST00000495485 ELF3P78545 371 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-214ENST00000495485 ZNF33BQ06732 778 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 GRIK2Q13002 908 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 GSTA3Q16772 222 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 PPP1R3AQ16821 1122 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 SPRED3Q2MJR0 410 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 SMU1Q2TAY7 513 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 LAIR1Q6GTX8 287 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 CYB5D1Q6P9G0 228 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 KIAA1324Q6UXG2 1013 aaKnown RBP10.03□□□□□ -0.8
HDAC3-214ENST00000495485 ADAMTSL4Q6UY14 1074 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 RFLNAQ6ZTI6 216 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 CEP68Q76N32 757 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 LPCAT2Q7L5N7 544 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 LRRC70Q7Z2Q7 622 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 GOLGA7Q7Z5G4 137 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 PHC3Q8NDX5 983 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 MAPK15Q8TD08 544 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 TWIST2Q8WVJ9 160 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 ASB11Q8WXH4 323 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 RHBDF1Q96CC6 855 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 CCDC138Q96M89 665 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 OR52B2Q96RD2 323 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 BTBD1Q9H0C5 482 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 DUSP15Q9H1R2 295 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-214ENST00000495485 WDR55Q9H6Y2 383 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-214ENST00000495485 IPPKQ9H8X2 491 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 EFCAB1Q9HAE3 211 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 PREBQ9HCU5 417 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 TMEM45AQ9NWC5 275 aa10.03□□□□□ -0.8
HDAC3-214ENST00000495485 EIF2B4Q9UI10 523 aaKnown RBP10.03□□□□□ -0.8
HDAC3-214ENST00000495485 CNOT1A5YKK6 2376 aaKnown RBP10.02□□□□□ -0.8
HDAC3-214ENST00000495485 H3BM21 787 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 GFYI3L273 518 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 SLC28A1O00337 649 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 INPP4BO15327 924 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 GSC2O15499 205 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 MAP3K13O43283 966 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 RNASEH2AO75792 299 aaKnown RBP10.02□□□□□ -0.81
HDAC3-214ENST00000495485 WFS1O76024 890 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 RPN2P04844 631 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 IDO1P14902 403 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 PIK3R1P27986 724 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 PGM1P36871 562 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 ACADVLP49748 655 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 TPMTP51580 245 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 HK3P52790 923 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 KCNJ2P63252 427 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 RPA4Q13156 261 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 ART3Q13508 389 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 UBAP2LQ14157 1087 aaKnown RBP10.02□□□□□ -0.81
HDAC3-214ENST00000495485 SIM2Q14190 667 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-214ENST00000495485 NAA25Q14CX7 972 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 MAP7D1Q3KQU3 841 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 UGT3A2Q3SY77 523 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 WDR45BQ5MNZ6 344 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 WASHC2DQ5SRD0 308 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 PIP5KL1Q5T9C9 394 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 CLEC6AQ6EIG7 209 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 PNCKQ6P2M8 343 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 ATG14Q6ZNE5 492 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 RNF165Q6ZSG1 346 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 CHSY3Q70JA7 882 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 LARP4Q71RC2 724 aaKnown RBP eCLIP10.02□□□□□ -0.81
HDAC3-214ENST00000495485 TRAPPC5Q8IUR0 188 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 FAM9CQ8IZT9 166 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 RASGEF1AQ8N9B8 481 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 FAM174AQ8TBP5 190 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 METTL6Q8TCB7 284 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 LKAAEAR1Q8TD35 194 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 TUBGCP3Q96CW5 907 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 LINC00615Q96LM1 132 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-214ENST00000495485 PPP1R36Q96LQ0 422 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 CATSPER2Q96P56 530 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 NTMT1Q9BV86 223 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 MRPL1Q9BYD6 325 aaKnown RBP10.02□□□□□ -0.81
HDAC3-214ENST00000495485 SLC29A3Q9BZD2 475 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 DPEP2Q9H4A9 486 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 NOL11Q9H8H0 719 aaKnown RBP10.02□□□□□ -0.81
HDAC3-214ENST00000495485 ZBTB26Q9HCK0 441 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 PHPT1Q9NRX4 125 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-214ENST00000495485 C2orf42Q9NWW7 574 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 FBXL12Q9NXK8 326 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 WSB2Q9NYS7 404 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-214ENST00000495485 TAS2R1Q9NYW7 299 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 SUSD2Q9UGT4 822 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 TRPS1Q9UHF7 1281 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 TMPRSS11EQ9UL52 423 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 SNX6Q9UNH7 406 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 PDE10AQ9Y233 779 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 ITM2BQ9Y287 266 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 DNAJC15Q9Y5T4 150 aa10.02□□□□□ -0.81
HDAC3-214ENST00000495485 TNRC6BQ9UPQ9 1833 aaKnown RBP10.01□□□□□ -0.81
HDAC3-214ENST00000495485 LRRK1Q38SD2 2015 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 IGHV1OR15-9A0A0B4J2B8 117 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 SLC5A10A0PJK1 596 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms