RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 NLE1Q9NVX2 485 aaPredicted RBP13.17□□□□□ -0.3
GPC1-209ENST00000495100 NEU3Q9UQ49 428 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 GPR45Q9Y5Y3 372 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 LCTP09848 1927 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 LOC285095A0A1B0GVY8 99 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 OAZ2O95190 189 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 HOXD8P13378 290 aaPredicted RBP13.17□□□□□ -0.3
GPC1-209ENST00000495100 VARSP26640 1264 aaKnown RBP13.17□□□□□ -0.3
GPC1-209ENST00000495100 PRKAG1P54619 331 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 ARSFP54793 590 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 VBP1P61758 197 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 GANABQ14697 944 aaKnown RBP13.17□□□□□ -0.3
GPC1-209ENST00000495100 PCBP2Q15366 365 aaKnown RBP eCLIP13.17□□□□□ -0.3
GPC1-209ENST00000495100 HKDC1Q2TB90 917 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 TTLL9Q3SXZ7 439 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 ATP13A5Q4VNC0 1218 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 PATL1Q86TB9 770 aaKnown RBP13.17□□□□□ -0.3
GPC1-209ENST00000495100 FUBP3Q96I24 572 aaKnown RBP eCLIP13.17□□□□□ -0.3
GPC1-209ENST00000495100 C8orf48Q96LL4 319 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 DERL2Q9GZP9 239 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 OSGEPL1Q9H4B0 414 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 IL26Q9NPH9 171 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 AIG1Q9NVV5 245 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 GPRC5BQ9NZH0 403 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 OGDHLQ9ULD0 1010 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 YIPF1Q9Y548 306 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 PCDHB3Q9Y5E6 796 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 OR6C75A6NL08 312 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 INPPL1O15357 1258 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 PRLP01236 227 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 SELPP16109 830 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 TGFBR1P36897 503 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 EGFLAMQ63HQ2 1017 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 RBFAQ8N0V3 343 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 TNIP2Q8NFZ5 429 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 C1orf74Q96LT6 269 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 BIRC8Q96P09 236 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
GPC1-209ENST00000495100 VPS9D1Q9Y2B5 631 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 MAP4K5Q9Y4K4 846 aa13.17□□□□□ -0.3
GPC1-209ENST00000495100 INMTO95050 263 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 CYP11A1P05108 521 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 SERPINA4P29622 427 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 RFC2P35250 354 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 RFX3P48380 749 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 POLD2P49005 469 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 KPNA1P52294 538 aaPredicted RBP13.16□□□□□ -0.3
GPC1-209ENST00000495100 NUP107P57740 925 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 FKBP1BP68106 108 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 CCDC85BQ15834 202 aaPredicted RBP13.16□□□□□ -0.3
GPC1-209ENST00000495100 KANK2Q63ZY3 851 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 SULT1C3Q6IMI6 304 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 TMPRSS11BQ86T26 416 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 TAGAPQ8N103 731 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 UBE2J2Q8N2K1 259 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 TFAP2CQ92754 450 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 RELTQ969Z4 430 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 TMEM161AQ9NX61 479 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 GMPPBQ9Y5P6 360 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 A0A0J9YVX5 310 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 ADAMTS4O75173 837 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 CYP7B1O75881 506 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 NADKO95544 446 aaPredicted RBP13.16□□□□□ -0.3
GPC1-209ENST00000495100 MAPKAPK2P49137 400 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 LIMS2Q7Z4I7 341 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 NETO1Q8TDF5 533 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 RORBQ92753 470 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 GTPBP3Q969Y2 492 aaKnown RBP13.16□□□□□ -0.3
GPC1-209ENST00000495100 MAELQ96JY0 434 aaKnown RBP13.16□□□□□ -0.3
GPC1-209ENST00000495100 HCFC1R1Q9NWW0 138 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 ACSL6Q9UKU0 697 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 PLAGL1Q9UM63 463 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 ITM2BQ9Y287 266 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 TBC1D30Q9Y2I9 924 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 TCRBV3S1A0A5B6 114 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 CA12O43570 354 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 RFPL2O75678 378 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 TGFB1P01137 390 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 PDYNP01213 254 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 IGLV3-25P01717 112 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 OGNP20774 298 aaKnown RBP13.16□□□□□ -0.3
GPC1-209ENST00000495100 PIGAP37287 484 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 CACNG1Q06432 222 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 PPP4R4Q6NUP7 873 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 MRPL10Q7Z7H8 261 aaKnown RBP13.16□□□□□ -0.3
GPC1-209ENST00000495100 ZDHHC21Q8IVQ6 265 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 CHST14Q8NCH0 376 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 DOK4Q8TEW6 326 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 ZNF597Q96LX8 424 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 DACH2Q96NX9 599 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 KCNC2Q96PR1 638 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 ASB2Q96Q27 587 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 SLC6A13Q9NSD5 602 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 GNPTGQ9UJJ9 305 aa13.16□□□□□ -0.3
GPC1-209ENST00000495100 FAM234BA2RU67 622 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 FCGR1AP12314 374 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 PTGER3P43115 390 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 CMPK2Q5EBM0 449 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 SLCO6A1Q86UG4 719 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 KLK6Q92876 244 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms