RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 UBE2FQ969M7 185 aa15.05■□□□□ -0
SDF4-207ENST00000494748 PRDM8Q9NQV8 689 aa15.05■□□□□ -0
SDF4-207ENST00000494748 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.05■□□□□ -06e-6■■■■□ 21.1
SDF4-207ENST00000494748 ABCG2Q9UNQ0 655 aa15.05■□□□□ -0
SDF4-207ENST00000494748 TPRKBQ9Y3C4 175 aa15.05■□□□□ -0
SDF4-207ENST00000494748 MICAL3Q7RTP6 2002 aa15.05■□□□□ -0
SDF4-207ENST00000494748 DSCR3O14972 297 aa15.05■□□□□ -0
SDF4-207ENST00000494748 EPOP01588 193 aa15.05■□□□□ -0
SDF4-207ENST00000494748 ST13P50502 369 aaKnown RBP15.05■□□□□ -0
SDF4-207ENST00000494748 NDUFA5Q16718 116 aa15.05■□□□□ -0
SDF4-207ENST00000494748 SPANXN4Q5MJ08 99 aa15.05■□□□□ -0
SDF4-207ENST00000494748 DNAJC14Q6Y2X3 702 aaPredicted RBP15.05■□□□□ -0
SDF4-207ENST00000494748 VASH1Q7L8A9 365 aaPredicted RBP15.05■□□□□ -0
SDF4-207ENST00000494748 MDGA1Q8NFP4 955 aa15.05■□□□□ -0
SDF4-207ENST00000494748 MCFD2Q8NI22 146 aa15.05■□□□□ -0
SDF4-207ENST00000494748 METTL6Q8TCB7 284 aa15.05■□□□□ -0
SDF4-207ENST00000494748 LINGO1Q96FE5 620 aa15.05■□□□□ -0
SDF4-207ENST00000494748 CPPED1Q9BRF8 314 aaPredicted RBP15.05■□□□□ -0
SDF4-207ENST00000494748 PDFQ9HBH1 243 aa15.05■□□□□ -0
SDF4-207ENST00000494748 IL37Q9NZH6 218 aa15.05■□□□□ -0
SDF4-207ENST00000494748 TBX1O43435 398 aa15.04■□□□□ -0
SDF4-207ENST00000494748 CD36P16671 472 aa15.04■□□□□ -0
SDF4-207ENST00000494748 PTPN6P29350 595 aa15.04■□□□□ -0
SDF4-207ENST00000494748 UGT2B10P36537 528 aa15.04■□□□□ -0
SDF4-207ENST00000494748 ACVRL1P37023 503 aa15.04■□□□□ -0
SDF4-207ENST00000494748 IL10RBQ08334 325 aa15.04■□□□□ -0
SDF4-207ENST00000494748 SERINC3Q13530 473 aa15.04■□□□□ -0
SDF4-207ENST00000494748 PTPRNQ16849 979 aa15.04■□□□□ -0
SDF4-207ENST00000494748 DESI1Q6ICB0 168 aa15.04■□□□□ -0
SDF4-207ENST00000494748 PSAPL1Q6NUJ1 521 aa15.04■□□□□ -0
SDF4-207ENST00000494748 SNX20Q7Z614 316 aa15.04■□□□□ -0
SDF4-207ENST00000494748 HOMEZQ8IX15 550 aa15.04■□□□□ -0
SDF4-207ENST00000494748 KRTCAP2Q8N6L1 136 aa15.04■□□□□ -0
SDF4-207ENST00000494748 SERHLQ9NQF3 203 aa15.04■□□□□ -0
SDF4-207ENST00000494748 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.04■□□□□ -0
SDF4-207ENST00000494748 TLR6Q9Y2C9 796 aa15.04■□□□□ -0
SDF4-207ENST00000494748 EFCAB9A8MZ26 197 aa15.04■□□□□ -0
SDF4-207ENST00000494748 M0R082 166 aa15.04■□□□□ -0
SDF4-207ENST00000494748 TAF4O00268 1085 aa15.04■□□□□ -0
SDF4-207ENST00000494748 SNPHO15079 494 aa15.04■□□□□ -0
SDF4-207ENST00000494748 SEMG1P04279 462 aa15.04■□□□□ -0
SDF4-207ENST00000494748 THP07101 528 aa15.04■□□□□ -0
SDF4-207ENST00000494748 ITGB6P18564 788 aa15.04■□□□□ -0
SDF4-207ENST00000494748 EFNA1P20827 205 aaPredicted RBP15.04■□□□□ -0
SDF4-207ENST00000494748 GGT5P36269 586 aa15.04■□□□□ -0
SDF4-207ENST00000494748 PCBP2Q15366 365 aaKnown RBP eCLIP15.04■□□□□ -05e-11■■■■□ 24.9
SDF4-207ENST00000494748 PARP15Q460N3 678 aa15.04■□□□□ -0
SDF4-207ENST00000494748 ALG1LQ6GMV1 187 aa15.04■□□□□ -0
SDF4-207ENST00000494748 CIR1Q86X95 450 aaPredicted RBP15.04■□□□□ -0
SDF4-207ENST00000494748 SETD9Q8NE22 299 aa15.04■□□□□ -0
SDF4-207ENST00000494748 GIPC2Q8TF65 315 aa15.04■□□□□ -0
SDF4-207ENST00000494748 PYURFQ96I23 114 aa15.04■□□□□ -0
SDF4-207ENST00000494748 DCSTAMPQ9H295 470 aa15.04■□□□□ -0
SDF4-207ENST00000494748 CLMPQ9H6B4 373 aa15.04■□□□□ -0
SDF4-207ENST00000494748 CD274Q9NZQ7 290 aa15.04■□□□□ -0
SDF4-207ENST00000494748 ACTL7AQ9Y615 435 aa15.04■□□□□ -0
SDF4-207ENST00000494748 MN1Q10571 1320 aaPredicted RBP15.04■□□□□ -0
SDF4-207ENST00000494748 MOXD2PA6NHM9 499 aa15.04■□□□□ -0
SDF4-207ENST00000494748 RGS10O43665 173 aa15.04■□□□□ -0
SDF4-207ENST00000494748 DYRK3O43781 588 aa15.04■□□□□ -0
SDF4-207ENST00000494748 CD9P21926 228 aa15.04■□□□□ -0
SDF4-207ENST00000494748 GRK5P34947 590 aa15.04■□□□□ -0
SDF4-207ENST00000494748 PBX3P40426 434 aa15.04■□□□□ -0
SDF4-207ENST00000494748 BRCC3P46736 316 aa15.04■□□□□ -0
SDF4-207ENST00000494748 SEPHS1P49903 392 aa15.04■□□□□ -0
SDF4-207ENST00000494748 MVKQ03426 396 aa15.04■□□□□ -0
SDF4-207ENST00000494748 PAN2Q504Q3 1202 aaKnown RBP15.04■□□□□ -0
SDF4-207ENST00000494748 NANOGNBQ7Z5D8 188 aa15.04■□□□□ -0
SDF4-207ENST00000494748 YME1L1Q96TA2 773 aa15.04■□□□□ -0
SDF4-207ENST00000494748 MYOCQ99972 504 aa15.04■□□□□ -0
SDF4-207ENST00000494748 EMILIN2Q9BXX0 1053 aa15.04■□□□□ -0
SDF4-207ENST00000494748 RIBC2Q9H4K1 309 aa15.04■□□□□ -0
SDF4-207ENST00000494748 CPA4Q9UI42 421 aa15.04■□□□□ -0
SDF4-207ENST00000494748 ANKRD34BA5PLL1 514 aa15.03■□□□□ -0
SDF4-207ENST00000494748 ARL5CA6NH57 179 aa15.03■□□□□ -0
SDF4-207ENST00000494748 SEC22BO75396 215 aa15.03■□□□□ -0
SDF4-207ENST00000494748 C1QCP02747 245 aa15.03■□□□□ -0
SDF4-207ENST00000494748 RPL38P63173 70 aaKnown RBP15.03■□□□□ -0
SDF4-207ENST00000494748 VAC14Q08AM6 782 aa15.03■□□□□ -0
SDF4-207ENST00000494748 ZNF404Q494X3 552 aa15.03■□□□□ -0
SDF4-207ENST00000494748 TUBA3EQ6PEY2 450 aa15.03■□□□□ -0
SDF4-207ENST00000494748 SUSD1Q6UWL2 747 aa15.03■□□□□ -0
SDF4-207ENST00000494748 NLGN4XQ8N0W4 816 aa15.03■□□□□ -0
SDF4-207ENST00000494748 POLR1EQ9GZS1 481 aaKnown RBP15.03■□□□□ -0
SDF4-207ENST00000494748 MMP27Q9H306 513 aa15.03■□□□□ -0
SDF4-207ENST00000494748 CEP350Q5VT06 3117 aa15.03■□□□□ -0
SDF4-207ENST00000494748 MRPS14O60783 128 aaKnown RBP15.03■□□□□ -0
SDF4-207ENST00000494748 GSNP06396 782 aa15.03■□□□□ -0
SDF4-207ENST00000494748 PGRP06401 933 aa15.03■□□□□ -0
SDF4-207ENST00000494748 MAPKAPK3Q16644 382 aa15.03■□□□□ -0
SDF4-207ENST00000494748 ATG9BQ674R7 924 aa15.03■□□□□ -0
SDF4-207ENST00000494748 ZNF540Q8NDQ6 660 aa15.03■□□□□ -0
SDF4-207ENST00000494748 OR4K2Q8NGD2 314 aa15.03■□□□□ -0
SDF4-207ENST00000494748 ZHX1-C8orf76Q96EF9 292 aa15.03■□□□□ -0
SDF4-207ENST00000494748 SERPINB11Q96P15 392 aa15.03■□□□□ -0
SDF4-207ENST00000494748 MIR1-1HGQ9H1L0 117 aa15.03■□□□□ -0
SDF4-207ENST00000494748 FARSBQ9NSD9 589 aaKnown RBP15.03■□□□□ -0
SDF4-207ENST00000494748 ALPK3Q96L96 1907 aa15.03■□□□□ -0
SDF4-207ENST00000494748 ZBBXA8MT70 800 aa15.03■□□□□ -0
SDF4-207ENST00000494748 PTTG1O95997 202 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms