RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 RNF128Q8TEB7 428 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 SYN2Q92777 582 aaPredicted RBP4.16□□□□□ -1.74
SMC4-224ENST00000494612 SLAMF9Q96A28 289 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 HDAC11Q96DB2 347 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 FER1L6-AS2Q96M78 137 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 LMF2Q9BU23 707 aaKnown RBP4.16□□□□□ -1.74
SMC4-224ENST00000494612 WNT5BQ9H1J7 359 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 S1PR5Q9H228 398 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 ANKZF1Q9H8Y5 726 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 APOBEC3GQ9HC16 384 aaKnown RBP4.16□□□□□ -1.74
SMC4-224ENST00000494612 MYNNQ9NPC7 610 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 OSGIN1Q9UJX0 560 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 ANAPC5Q9UJX4 755 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 ICAM5Q9UMF0 924 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 CCL27Q9Y4X3 112 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 CCDC88BA6NC98 1476 aa4.16□□□□□ -1.74
SMC4-224ENST00000494612 POLA1P09884 1462 aaPredicted RBP4.16□□□□□ -1.74
SMC4-224ENST00000494612 SOGA1O94964 1423 aa4.15□□□□□ -1.74
SMC4-224ENST00000494612 WDR97A6NE52 1622 aa4.15□□□□□ -1.74
SMC4-224ENST00000494612 OR6C76A6NM76 312 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 PLOD2O00469 737 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 LINC01565O15544 149 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 OR10H2O60403 315 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 ACSL3O95573 720 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 NR3C1P04150 777 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 CCDC175P0C221 793 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 ACHEP22303 614 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 JAK1P23458 1154 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 MAPK12P53778 367 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 PPARDQ03181 441 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 ACSM1Q08AH1 577 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 ARL16Q0P5N6 197 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 NR1D2Q14995 579 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 ZNF718Q3SXZ3 478 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 GDPD4Q6W3E5 623 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 PPP1R21Q6ZMI0 780 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 FOXL2NBQ6ZUU3 175 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 ARHGAP22Q7Z5H3 698 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 DNAJB7Q7Z6W7 309 aaPredicted RBP4.15□□□□□ -1.75
SMC4-224ENST00000494612 SLFN11Q7Z7L1 901 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 ANKRD13CQ8N6S4 541 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 OR13J1Q8NGT2 312 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 KIF18AQ8NI77 898 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 ZNF354BQ96LW1 612 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 C17orf77Q96MU5 243 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 SEPHS2Q99611 448 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 LRRC1Q9BTT6 524 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 FKRPQ9H9S5 495 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 Q9N2K0 584 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 OLFML3Q9NRN5 406 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 B3GAT1Q9P2W7 334 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 KCNG2Q9UJ96 466 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 MAGI1Q96QZ7 1491 aaPredicted RBP4.15□□□□□ -1.75
SMC4-224ENST00000494612 RAD54L2Q9Y4B4 1467 aa4.15□□□□□ -1.75
SMC4-224ENST00000494612 SYNJ2O15056 1496 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 NOTCH3Q9UM47 2321 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 A0A1W2PS18 150 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 TMEM221A6NGB7 291 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 DUXAA6NLW8 204 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 IGHV4-39P01824 125 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 FDPSP14324 419 aaKnown RBP4.14□□□□□ -1.75
SMC4-224ENST00000494612 ZNF23P17027 643 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 MTHFRP42898 656 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 ZNF41P51814 821 aaPredicted RBP4.14□□□□□ -1.75
SMC4-224ENST00000494612 MZT1Q08AG7 82 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 MFAP5Q13361 173 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 OTUD3Q5T2D3 398 aaPredicted RBP4.14□□□□□ -1.75
SMC4-224ENST00000494612 FAM109BQ6ICB4 259 aaPredicted RBP4.14□□□□□ -1.75
SMC4-224ENST00000494612 IL27RAQ6UWB1 636 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 SUSD1Q6UWL2 747 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 MFN1Q8IWA4 741 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 CPSF7Q8N684 471 aaKnown RBP4.14□□□□□ -1.75
SMC4-224ENST00000494612 METTL27Q8N6F8 245 aaPredicted RBP4.14□□□□□ -1.75
SMC4-224ENST00000494612 PAPD5Q8NDF8 572 aaKnown RBP4.14□□□□□ -1.75
SMC4-224ENST00000494612 MOSPD2Q8NHP6 518 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 ZNF473Q8WTR7 871 aaKnown RBP4.14□□□□□ -1.75
SMC4-224ENST00000494612 THOC1Q96FV9 657 aaKnown RBP4.14□□□□□ -1.75
SMC4-224ENST00000494612 OTUB1Q96FW1 271 aaPredicted RBP4.14□□□□□ -1.75
SMC4-224ENST00000494612 ST6GAL2Q96JF0 529 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 EPYCQ99645 322 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 TRMT61BQ9BVS5 477 aaKnown RBP4.14□□□□□ -1.75
SMC4-224ENST00000494612 ERVMER34-1Q9H9K5 563 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 A4GALTQ9NPC4 353 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 PIH1D3Q9NQM4 214 aaKnown RBP4.14□□□□□ -1.75
SMC4-224ENST00000494612 ZFP57Q9NU63 452 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 STK26Q9P289 416 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 CPSF3Q9UKF6 684 aaKnown RBP4.14□□□□□ -1.75
SMC4-224ENST00000494612 GRIP1Q9Y3R0 1128 aa4.14□□□□□ -1.75
SMC4-224ENST00000494612 GRIN2BQ13224 1484 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 A0A1W2PPI3 338 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 A0A1W2PRB8 838 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 E9PI62 339 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 LMX1BO60663 402 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 PDE9AO76083 593 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 FYNP06241 537 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 F7P08709 466 aaPredicted RBP4.13□□□□□ -1.75
SMC4-224ENST00000494612 DANCRP0C864 163 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 GLULP15104 373 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 GNAZP19086 355 aa4.13□□□□□ -1.75
SMC4-224ENST00000494612 MARK3P27448 753 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms