RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 F8W8V4 182 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 MATN2O00339 956 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 STK17BO94768 372 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 GOT2P00505 430 aaKnown RBP12.83□□□□□ -0.36
ERCC3-209ENST00000494464 FTH1P02794 183 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 ITGB2P05107 769 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 OR56A5P0C7T3 313 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 FGF5P12034 268 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 WT1P19544 449 aaPredicted RBP12.83□□□□□ -0.36
ERCC3-209ENST00000494464 MAP4P27816 1152 aaKnown RBP12.83□□□□□ -0.36
ERCC3-209ENST00000494464 MAGEA6P43360 314 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 SEPHS1P49903 392 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 SH3BP2P78314 561 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 PRAMEP78395 509 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 KRT71Q3SY84 523 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 PCID2Q5JVF3 399 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 CENPUQ71F23 418 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 ZNF534Q76KX8 674 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 OR4L1Q8NH43 312 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 OR6C1Q96RD1 312 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 IL22Q9GZX6 179 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 MVB12BQ9H7P6 319 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 HRASLS2Q9NWW9 162 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 PRSS21Q9Y6M0 314 aa12.83□□□□□ -0.36
ERCC3-209ENST00000494464 IGHV5-51A0A0C4DH38 117 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 E7ESA3 106 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 C1QL1O75973 258 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 SHBGP04278 402 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 LIFP15018 202 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 PDHA2P29803 388 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 PPARGP37231 505 aaPredicted RBP12.82□□□□□ -0.36
ERCC3-209ENST00000494464 PREPP48147 710 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 PLOD1Q02809 727 aaPredicted RBP12.82□□□□□ -0.36
ERCC3-209ENST00000494464 FOXM1Q08050 763 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 ABHD18Q0P651 414 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 BOP1Q14137 746 aaKnown RBP12.82□□□□□ -0.36
ERCC3-209ENST00000494464 KRT33BQ14525 404 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 TUBB8Q3ZCM7 444 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 AARS2Q5JTZ9 985 aaKnown RBP12.82□□□□□ -0.36
ERCC3-209ENST00000494464 ARMC3Q5W041 872 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 TIPARPQ7Z3E1 657 aaKnown RBP12.82□□□□□ -0.36
ERCC3-209ENST00000494464 ESX1Q8N693 406 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 TLCD1Q96CP7 247 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 MAP3K3Q99759 626 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 MRM3Q9HC36 420 aaKnown RBP12.82□□□□□ -0.36
ERCC3-209ENST00000494464 TREX1Q9NSU2 369 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 POMT2Q9UKY4 750 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 KALRNO60229 2985 aa12.82□□□□□ -0.36
ERCC3-209ENST00000494464 SLC5A10A0PJK1 596 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 OR6C74A6NCV1 312 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 STAT5AP42229 794 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 MAGEA4P43358 317 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 NPY2RP49146 381 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 ARL4CP56559 192 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 SESN2P58004 480 aaPredicted RBP12.81□□□□□ -0.36
ERCC3-209ENST00000494464 PRKAA1Q13131 559 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 KCNJ11Q14654 390 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 HIF1AQ16665 826 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.81□□□□□ -0.36
ERCC3-209ENST00000494464 FASTKD1Q53R41 847 aaKnown RBP12.81□□□□□ -0.36
ERCC3-209ENST00000494464 ARMC6Q6NXE6 501 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 BPHLQ86WA6 291 aaPredicted RBP12.81□□□□□ -0.36
ERCC3-209ENST00000494464 MPP5Q8N3R9 675 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 ARFGAP2Q8N6H7 521 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 SIDT2Q8NBJ9 832 aaKnown RBP12.81□□□□□ -0.36
ERCC3-209ENST00000494464 OR52E1Q8NGJ3 308 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 OR6P1Q8NGX9 317 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 ELMO1Q92556 727 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 TFGQ92734 400 aaPredicted RBP12.81□□□□□ -0.36
ERCC3-209ENST00000494464 ZBTB9Q96C00 473 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 SLC45A3Q96JT2 553 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 FCRL4Q96PJ5 515 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 FERD3LQ96RJ6 166 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 EFHD1Q9BUP0 239 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 SLC12A9Q9BXP2 914 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 ULBP3Q9BZM4 244 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 STMN4Q9H169 189 aaPredicted RBP12.81□□□□□ -0.36
ERCC3-209ENST00000494464 TFB2MQ9H5Q4 396 aaKnown RBP12.81□□□□□ -0.36
ERCC3-209ENST00000494464 PPCSQ9HAB8 311 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 CATSPERZQ9NTU4 200 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 BFARQ9NZS9 450 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 BTRCQ9Y297 605 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 UBA6A0AVT1 1052 aaPredicted RBP12.81□□□□□ -0.36
ERCC3-209ENST00000494464 OR1I1O60431 355 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 SHOX2O60902 331 aaPredicted RBP12.81□□□□□ -0.36
ERCC3-209ENST00000494464 TMEM63AO94886 807 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 ACSL3O95573 720 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 ZBTB11O95625 1053 aaPredicted RBP12.81□□□□□ -0.36
ERCC3-209ENST00000494464 PRB1P04280 392 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 ZNF28P17035 718 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 NR1D1P20393 614 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 ACADLP28330 430 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 TTPAP49638 278 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 KPNA2P52292 529 aaKnown RBP12.81□□□□□ -0.36
ERCC3-209ENST00000494464 GYS2P54840 703 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 HSD11B2P80365 405 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 ACY1Q03154 408 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 TUBB3Q13509 450 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 SEMA3AQ14563 771 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 SYTL3Q4VX76 610 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms