RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 KRT19P08727 400 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 RARGP13631 454 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 MYL6BP14649 208 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 MSH3P20585 1137 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 ARL3P36405 182 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 PPARGP37231 505 aaPredicted RBP3.45□□□□□ -1.86
CD46-217ENST00000493796 PRAMEP78395 509 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 PPIGQ13427 754 aaKnown RBP eCLIP3.45□□□□□ -1.862e-9■□□□□ 9
CD46-217ENST00000493796 KRT32Q14532 448 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 DUOXA1Q1HG43 343 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 ASTE1Q2TB18 679 aaPredicted RBP3.45□□□□□ -1.86
CD46-217ENST00000493796 ZC2HC1CQ53FD0 456 aaPredicted RBP3.45□□□□□ -1.86
CD46-217ENST00000493796 ASPRV1Q53RT3 343 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 RARS2Q5T160 578 aaKnown RBP3.45□□□□□ -1.86
CD46-217ENST00000493796 TMEM198Q66K66 360 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 HAUS3Q68CZ6 603 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 KLHL35Q6PF15 583 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 ZNF534Q76KX8 674 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 COPS6Q7L5N1 327 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 TRPT1Q86TN4 253 aaKnown RBP3.45□□□□□ -1.86
CD46-217ENST00000493796 CEP97Q8IW35 865 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 TRIM58Q8NG06 486 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 TAS1R2Q8TE23 839 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 ZNF473Q8WTR7 871 aaKnown RBP3.45□□□□□ -1.86
CD46-217ENST00000493796 CMTM3Q96MX0 182 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 NUDCD1Q96RS6 583 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 NCAPGQ9BPX3 1015 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 ITPAQ9BY32 194 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 BARHL1Q9BZE3 327 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 SH2D4AQ9H788 454 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 TMOD3Q9NYL9 352 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 TSPYL4Q9UJ04 414 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 ABCC12Q96J65 1359 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 PXDNLA1KZ92 1463 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 DLEC1Q9Y238 1755 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 SCN9AQ15858 1988 aa3.45□□□□□ -1.86
CD46-217ENST00000493796 IL16Q14005 1332 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 SMCHD1A6NHR9 2005 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 ADAMTSL1Q8N6G6 1762 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 MYO1GB0I1T2 1018 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 F5H0A9 414 aaPredicted RBP3.44□□□□□ -1.86
CD46-217ENST00000493796 TMEM189-UBE2V1I3L0A0 370 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 HS6ST1O60243 411 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 SYNCRIPO60506 623 aaKnown RBP3.44□□□□□ -1.86
CD46-217ENST00000493796 OR2C1O95371 312 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 CAVIN2O95810 425 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 TSHBP01222 138 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 NR3C1P04150 777 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 ERVK-10P10266 1014 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 HOXC8P31273 242 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 MMP15P51511 669 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 SETQ01105 290 aaPredicted RBP3.44□□□□□ -1.86
CD46-217ENST00000493796 AIMP1Q12904 312 aaKnown RBP3.44□□□□□ -1.86
CD46-217ENST00000493796 UBE2V1Q13404 147 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 SLC15A2Q16348 729 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 TWISTNBQ3B726 338 aaPredicted RBP3.44□□□□□ -1.86
CD46-217ENST00000493796 C1orf141Q5JVX7 400 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 NDUFAF5Q5TEU4 345 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 SUSD4Q5VX71 490 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 FBXL22Q6P050 247 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 RBMS3Q6XE24 437 aaKnown RBP3.44□□□□□ -1.86
CD46-217ENST00000493796 IKBIPQ70UQ0 350 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 PTOV1Q86YD1 416 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 TICAM1Q8IUC6 712 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 APLFQ8IW19 511 aaPredicted RBP3.44□□□□□ -1.86
CD46-217ENST00000493796 SMPDL3BQ92485 455 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 MPP4Q96JB8 637 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 PRMT6Q96LA8 375 aaPredicted RBP3.44□□□□□ -1.86
CD46-217ENST00000493796 GAD1Q99259 594 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 SEMA6AQ9H2E6 1030 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 PLK3Q9H4B4 646 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 RAD21L1Q9H4I0 556 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 BICC1Q9H694 974 aaKnown RBP3.44□□□□□ -1.86
CD46-217ENST00000493796 KAT14Q9H8E8 782 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 APOBEC3GQ9HC16 384 aaKnown RBP3.44□□□□□ -1.86
CD46-217ENST00000493796 SLC52A3Q9NQ40 469 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 SMC4Q9NTJ3 1288 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 SLC38A7Q9NVC3 462 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 SESN1Q9Y6P5 492 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 SNED1Q8TER0 1413 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 MAPK8IP3Q9UPT6 1336 aa3.44□□□□□ -1.86
CD46-217ENST00000493796 DUOX1Q9NRD9 1551 aa3.43□□□□□ -1.86
CD46-217ENST00000493796 CEP350Q5VT06 3117 aa3.43□□□□□ -1.86
CD46-217ENST00000493796 PLEKHG2Q9H7P9 1386 aa3.43□□□□□ -1.86
CD46-217ENST00000493796 AKAP11Q9UKA4 1901 aa3.43□□□□□ -1.86
CD46-217ENST00000493796 TEX13DA0A0J9YY54 714 aaPredicted RBP3.43□□□□□ -1.86
CD46-217ENST00000493796 PI4KAP2A4QPH2 592 aa3.43□□□□□ -1.86
CD46-217ENST00000493796 PLK4O00444 970 aa3.43□□□□□ -1.86
CD46-217ENST00000493796 USO1O60763 962 aaKnown RBP3.43□□□□□ -1.86
CD46-217ENST00000493796 SRPRAP08240 638 aaKnown RBP3.43□□□□□ -1.86
CD46-217ENST00000493796 PRSS56P0CW18 603 aa3.43□□□□□ -1.86
CD46-217ENST00000493796 ALDH4A1P30038 563 aa3.43□□□□□ -1.86
CD46-217ENST00000493796 CHRNB4P30926 498 aa3.43□□□□□ -1.86
CD46-217ENST00000493796 HOXA13P31271 388 aaPredicted RBP3.43□□□□□ -1.86
CD46-217ENST00000493796 VEGFCP49767 419 aa3.43□□□□□ -1.86
CD46-217ENST00000493796 CAMPP49913 170 aa3.43□□□□□ -1.86
CD46-217ENST00000493796 PMP22Q01453 160 aa3.43□□□□□ -1.86
CD46-217ENST00000493796 TEFQ10587 303 aa3.43□□□□□ -1.86
CD46-217ENST00000493796 MAMLD1Q13495 774 aa3.43□□□□□ -1.86
CD46-217ENST00000493796 MEP1AQ16819 746 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms