RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 ARSGQ96EG1 525 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 GMPPAQ96IJ6 420 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-216ENST00000493758 ART5Q96L15 291 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 WNT5BQ9H1J7 359 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 EQTNQ9NQ60 294 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 SDR39U1Q9NRG7 319 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-216ENST00000493758 GDE1Q9NZC3 331 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 MRPL15Q9P015 296 aaKnown RBP3.8□□□□□ -1.8
ITGB1-216ENST00000493758 PYGO1Q9Y3Y4 419 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 TRIM17Q9Y577 477 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 ARHGEF9O43307 516 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 NR2F1P10589 423 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 KRT5P13647 590 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 MAGEA11P43364 429 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 SLC9A3P48764 834 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 CDH11P55287 796 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 PSMC6P62333 389 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 MAT1AQ00266 395 aaKnown RBP3.79□□□□□ -1.8
ITGB1-216ENST00000493758 SLC16A9Q7RTY1 509 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 TMEM173Q86WV6 379 aaPredicted RBP3.79□□□□□ -1.8
ITGB1-216ENST00000493758 SCML4Q8N228 414 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 FBXO39Q8N4B4 442 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 NPEPL1Q8NDH3 523 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 MRGPRDQ8TDS7 321 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 HPSE2Q8WWQ2 592 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 IRGQQ8WZA9 623 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 JAKMIP2Q96AA8 810 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 TMCO6Q96DC7 493 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 CDRT15Q96T59 188 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 FGF21Q9NSA1 209 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 ATAD3AQ9NVI7 634 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 LRWD1Q9UFC0 647 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 TUBE1Q9UJT0 475 aa3.79□□□□□ -1.8
ITGB1-216ENST00000493758 PLOD2O00469 737 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 ZNF197O14709 1029 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 NGFP01138 241 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 GPIP06744 558 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 IGHV4-31P0DP07 118 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 TYMPP19971 482 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 BMXP51813 675 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 HERV-K104P61576 105 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 CBWD6Q4V339 395 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 CBWD3Q5JTY5 395 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 FFAR4Q5NUL3 377 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 ZNF497Q6ZNH5 498 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 PIGZQ86VD9 579 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 DNAAF5Q86Y56 855 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 FAM114A1Q8IWE2 563 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 MAML2Q8IZL2 1156 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-216ENST00000493758 ATL1Q8WXF7 558 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 TMEM143Q96AN5 459 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 NSL1Q96IY1 281 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 OLFM1Q99784 485 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 FNDC11Q9BVV2 318 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 ANKZF1Q9H8Y5 726 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 PDE7BQ9NP56 450 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 A4GALTQ9NPC4 353 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 MORF4L1Q9UBU8 362 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 CACNG5Q9UF02 275 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 CHORDC1Q9UHD1 332 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-216ENST00000493758 GRID1Q9ULK0 1009 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 RNF215Q9Y6U7 377 aa3.78□□□□□ -1.8
ITGB1-216ENST00000493758 IGKV3D-15A0A087WSY6 115 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 A0A1B0GU03 582 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 O00370 1275 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 DFFBO76075 338 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 ZWINTO95229 277 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 RAF1P04049 648 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 IRX1P78414 480 aaPredicted RBP3.77□□□□□ -1.81
ITGB1-216ENST00000493758 ELFN2Q5R3F8 820 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 ARHGEF16Q5VV41 709 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 TMEM211Q6ICI0 200 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 FAM198BQ6UWH4 519 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 ZNF595Q8IYB9 648 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 SYT2Q8N9I0 419 aaPredicted RBP3.77□□□□□ -1.81
ITGB1-216ENST00000493758 OR5AP2Q8NGF4 316 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 OR5M8Q8NGP6 311 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 OR52N5Q8NH56 324 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 PHLDA1Q8WV24 401 aaPredicted RBP3.77□□□□□ -1.81
ITGB1-216ENST00000493758 SPACA9Q96E40 222 aaPredicted RBP3.77□□□□□ -1.81
ITGB1-216ENST00000493758 SERINC1Q9NRX5 453 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 RNF186Q9NXI6 227 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 DPP3Q9NY33 737 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 B3GAT1Q9P2W7 334 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 RASAL2Q9UJF2 1139 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 PRSS21Q9Y6M0 314 aa3.77□□□□□ -1.81
ITGB1-216ENST00000493758 PCDH11YQ9BZA8 1340 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 MSGN1A6NI15 193 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 CYSRT1A8MQ03 144 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 K7ENM7 598 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 TRMUO75648 421 aaKnown RBP3.76□□□□□ -1.81
ITGB1-216ENST00000493758 GABRA5P31644 462 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 ALDH3A2P51648 485 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 MAZP56270 477 aaKnown RBP3.76□□□□□ -1.81
ITGB1-216ENST00000493758 KRTAP10-12P60413 245 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 CDR2Q01850 454 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 XKR6Q5GH73 641 aa3.76□□□□□ -1.81
ITGB1-216ENST00000493758 RNASEH2BQ5TBB1 312 aaKnown RBP3.76□□□□□ -1.81
ITGB1-216ENST00000493758 PRPF39Q86UA1 669 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms