RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 FAM173BQ6P4H8 233 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 MOB3CQ70IA8 216 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 ANO5Q75V66 913 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 MIER3Q7Z3K6 550 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 ODF3L1Q8IXM7 274 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.07□□□□□ -1.92
PTCD3-218ENST00000493430 BLIDQ8IZY5 108 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 SCCPDHQ8NBX0 429 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 FAM76AQ8TAV0 307 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 ETNPPLQ8TBG4 499 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 TAS1R2Q8TE23 839 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 RAB40AQ8WXH6 277 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 SEPT8Q92599 483 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 RPS6KC1Q96S38 1066 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 SDF4Q9BRK5 362 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 ZNF577Q9BSK1 485 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 ZMYND12Q9H0C1 365 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 LMAN2LQ9H0V9 348 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 SLC32A1Q9H598 525 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 UBE2ZQ9H832 354 aaPredicted RBP3.07□□□□□ -1.92
PTCD3-218ENST00000493430 PLEKHA5Q9HAU0 1116 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 XPNPEP1Q9NQW7 623 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 RBM28Q9NW13 759 aaKnown RBP3.07□□□□□ -1.92
PTCD3-218ENST00000493430 ERAP1Q9NZ08 941 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 KIF17Q9P2E2 1029 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 ORC3Q9UBD5 711 aaPredicted RBP3.07□□□□□ -1.92
PTCD3-218ENST00000493430 GDAQ9Y2T3 454 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 NUMA1Q14980 2115 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 IGKV6D-21A0A0A0MT36 114 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 IGKV3D-20A0A0C4DH25 116 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 MBLAC1A4D2B0 266 aaPredicted RBP3.06□□□□□ -1.92
PTCD3-218ENST00000493430 F5H423 210 aaPredicted RBP3.06□□□□□ -1.92
PTCD3-218ENST00000493430 USO1O60763 962 aaKnown RBP3.06□□□□□ -1.92
PTCD3-218ENST00000493430 PFKFB2O60825 505 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 MED24O75448 989 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 RPS6KA5O75582 802 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 PSMD10O75832 226 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 DDHD2O94830 711 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 NFASCO94856 1347 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 ACTN1P12814 892 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 KRT5P13647 590 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 EPCAMP16422 314 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 IFNAR1P17181 557 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 USP8P40818 1118 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 NRIP1P48552 1158 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 GNAQP50148 359 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 GPC3P51654 580 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 SEC61BP60468 96 aaKnown RBP3.06□□□□□ -1.92
PTCD3-218ENST00000493430 SPAG1Q07617 926 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 IL17AQ16552 155 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 CTF1Q16619 201 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 GLRA4Q5JXX5 417 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 SPOUT1Q5T280 376 aaKnown RBP3.06□□□□□ -1.92
PTCD3-218ENST00000493430 GFRALQ6UXV0 394 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 KMT5CQ86Y97 462 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 ABCA7Q8IZY2 2146 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 STKLD1Q8NE28 680 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 CHD5Q8TDI0 1954 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 ATP8B4Q8TF62 1192 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 POF1BQ8WVV4 589 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 SEPT1Q8WYJ6 367 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 RND1Q92730 232 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 GTF3C6Q969F1 213 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 TOP1MTQ969P6 601 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 ZNF570Q96NI8 536 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 SCLT1Q96NL6 688 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 F2RL3Q96RI0 385 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 TGS1Q96RS0 853 aaKnown RBP3.06□□□□□ -1.92
PTCD3-218ENST00000493430 CD180Q99467 661 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 MPHOSPH6Q99547 160 aaKnown RBP3.06□□□□□ -1.92
PTCD3-218ENST00000493430 CLSTN3Q9BQT9 956 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 LXNQ9BS40 222 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.06□□□□□ -1.92
PTCD3-218ENST00000493430 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 ZNF700Q9H0M5 742 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 CSTL1Q9H114 145 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 NXF3Q9H4D5 531 aaKnown RBP3.06□□□□□ -1.92
PTCD3-218ENST00000493430 SMARCAD1Q9H4L7 1026 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 STN1Q9H668 368 aaKnown RBP3.06□□□□□ -1.92
PTCD3-218ENST00000493430 CWH43Q9H720 699 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 PLCB1Q9NQ66 1216 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 CNGB3Q9NQW8 809 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 FAM118AQ9NWS6 357 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 MIOSQ9NXC5 875 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 DDX25Q9UHL0 483 aaKnown RBP3.06□□□□□ -1.92
PTCD3-218ENST00000493430 MUTYHQ9UIF7 546 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 RALYQ9UKM9 306 aaKnown RBP3.06□□□□□ -1.92
PTCD3-218ENST00000493430 ZNF215Q9UL58 517 aaPredicted RBP3.06□□□□□ -1.92
PTCD3-218ENST00000493430 DNAJC16Q9Y2G8 782 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 PRG3Q9Y2Y8 225 aaPredicted RBP3.06□□□□□ -1.92
PTCD3-218ENST00000493430 CYP46A1Q9Y6A2 500 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 TRIOO75962 3097 aa3.06□□□□□ -1.92
PTCD3-218ENST00000493430 PLXND1Q9Y4D7 1925 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 NRCAMQ92823 1304 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 ESYT2A0FGR8 921 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 CPLX1O14810 134 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 ADAM12O43184 909 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 MBTPS2O43462 519 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 BAIAP3O94812 1187 aa3.05□□□□□ -1.92
PTCD3-218ENST00000493430 REC8O95072 547 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms