RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ANKRD34CP0C6C1 535 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 GABRB3P28472 473 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 ETV5P41161 510 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 ERVPABLB-1P60509 514 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 ACACAQ13085 2346 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 KLHL38Q2WGJ6 581 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 SDK2Q58EX2 2172 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 RBM20Q5T481 1227 aaKnown RBP12.41□□□□□ -0.42
CLIP2-209ENST00000493166 TTC23LQ6PF05 361 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 CEP128Q6ZU80 1094 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 C3orf62Q6ZUJ4 267 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 PRSS42Q7Z5A4 293 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 STRA8Q7Z7C7 330 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 SLC26A11Q86WA9 606 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 GPATCH11Q8N954 259 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 GIMAP7Q8NHV1 300 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 CD200R1Q8TD46 325 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 CDKL2Q92772 493 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 INPP5DQ92835 1189 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 CD180Q99467 661 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 SLC30A3Q99726 388 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 NRTNQ99748 197 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 ZNF768Q9H5H4 540 aaKnown RBP12.41□□□□□ -0.42
CLIP2-209ENST00000493166 PLAGL1Q9UM63 463 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 MED16Q9Y2X0 877 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 DHRS7Q9Y394 339 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 NFS1Q9Y697 457 aa12.41□□□□□ -0.42
CLIP2-209ENST00000493166 ZFHX4Q86UP3 3567 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 TCRBV9S1A1TA0A576 114 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 CDRT15L2A8MXV6 281 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 C2orf74A8MZ97 194 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 BTN3A3O00478 584 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 KIF1CO43896 1103 aaKnown RBP12.4□□□□□ -0.42
CLIP2-209ENST00000493166 MATN4O95460 622 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 C1orf105O95561 183 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 FGF3P11487 239 aaPredicted RBP12.4□□□□□ -0.42
CLIP2-209ENST00000493166 CCL4P13236 92 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 ENO3P13929 434 aaPredicted RBP12.4□□□□□ -0.42
CLIP2-209ENST00000493166 CCNFP41002 786 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 BDKRB1P46663 353 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 SEPHS1P49903 392 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 KPNA2P52292 529 aaKnown RBP12.4□□□□□ -0.42
CLIP2-209ENST00000493166 CDKN2DP55273 166 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 GPX6P59796 221 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 ST3GAL2Q16842 350 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 FAM45BPQ6NSW5 357 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 NEK10Q6ZWH5 1172 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 PROSER1Q86XN7 944 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 CPNE9Q8IYJ1 553 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 FAM45AQ8TCE6 357 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 MAGEC3Q8TD91 643 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 UBXN4Q92575 508 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 FGF11Q92914 225 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 FMO2Q99518 471 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 MAP3K3Q99759 626 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 TSPYL1Q9H0U9 437 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 OCIAD1Q9NX40 245 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 SLC39A1Q9NY26 324 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 ACTR10Q9NZ32 417 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 OR6C2Q9NZP2 312 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 TXNDC16Q9P2K2 825 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 CIDEBQ9UHD4 219 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 POMT2Q9UKY4 750 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 ZMIZ1Q9ULJ6 1067 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 PSAT1Q9Y617 370 aa12.4□□□□□ -0.42
CLIP2-209ENST00000493166 DSPP15924 2871 aaKnown RBP12.4□□□□□ -0.43
CLIP2-209ENST00000493166 KMT2BQ9UMN6 2715 aaPredicted RBP12.39□□□□□ -0.43
CLIP2-209ENST00000493166 APC2O95996 2303 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 IGHV5-51A0A0C4DH38 117 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 PIPSLA2A3N6 862 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 B4E171 279 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 EIF3FO00303 357 aaPredicted RBP12.39□□□□□ -0.43
CLIP2-209ENST00000493166 TLX3O43711 291 aaPredicted RBP12.39□□□□□ -0.43
CLIP2-209ENST00000493166 ZNF500O60304 480 aaPredicted RBP12.39□□□□□ -0.43
CLIP2-209ENST00000493166 SPAG6O75602 509 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 PIAS1O75925 651 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 CATP04040 527 aaKnown RBP12.39□□□□□ -0.43
CLIP2-209ENST00000493166 RHOXF2BP0C7M4 288 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 MPC1LP0DKB6 136 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 CBSLP0DN79 551 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 CDH3P22223 829 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 MCM3P25205 808 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 PKLRP30613 574 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 STX2P32856 288 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 CBSP35520 551 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 TSPAN7P41732 249 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 SKIV2L2P42285 1042 aaKnown RBP12.39□□□□□ -0.43
CLIP2-209ENST00000493166 ARL4DP49703 201 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 RGS4P49798 205 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 RAB28P51157 221 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 PCBP4P57723 403 aaKnown RBP12.39□□□□□ -0.43
CLIP2-209ENST00000493166 RAB15P59190 212 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 PDAP1Q13442 181 aaKnown RBP12.39□□□□□ -0.43
CLIP2-209ENST00000493166 KYNUQ16719 465 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 TMEM164Q5U3C3 297 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 HECTD2Q5U5R9 776 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 LRRC8EQ6NSJ5 796 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 CYS1Q717R9 158 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 CLEC14AQ86T13 490 aa12.39□□□□□ -0.43
CLIP2-209ENST00000493166 IFT20Q8IY31 132 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms