RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-217	ENST00000492883	FAM95C	A0A1B0GW59	222 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	MATN2	O00339	956 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	BTN3A3	O00478	584 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	TOX3	O15405	576 aa	Predicted RBP	13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	MATN4	O95460	622 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	C1orf105	O95561	183 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	MPC1L	P0DKB6	136 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	CCNF	P41002	786 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	SEPHS1	P49903	392 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	SLC12A2	P55011	1212 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	PPP1CA	P62136	330 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	SLMAP	Q14BN4	828 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	PAQR3	Q6TCH7	311 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	ARHGAP22	Q7Z5H3	698 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	FAM129C	Q86XR2	697 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	SPNS2	Q8IVW8	549 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	RAB42	Q8N4Z0	105 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	MDM1	Q8TC05	714 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	RHOJ	Q9H4E5	214 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	NINJ2	Q9NZG7	142 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	PISD	Q9UG56	409 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	CIDEB	Q9UHD4	219 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883	LNPEP	Q9UIQ6	1025 aa		13.56	□□□□□ -0.24
CCM2-217	ENST00000492883		A0A1W2PNU3	283 aa	Predicted RBP	13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	PMS2P1	A4D2B8	440 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	EFCAB7	A8K855	629 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	C2orf74	A8MZ97	194 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	BTN3A1	O00481	513 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	ZBTB14	O43829	449 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	KIF1C	O43896	1103 aa	Known RBP	13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	BRINP1	O60477	761 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	ACSL3	O95573	720 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	CAT	P04040	527 aa	Known RBP	13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	TPBGL	P0DKB5	382 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	CCL4	P13236	92 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	ITIH1	P19827	911 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	CD9	P21926	228 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	FDXR	P22570	491 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	MAP4	P27816	1152 aa	Known RBP	13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	GP5	P40197	560 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	BDKRB1	P46663	353 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	ARL4D	P49703	201 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	MAPK10	P53779	464 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	IL2	P60568	153 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	GRTP1	Q5TC63	336 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	LRRC8E	Q6NSJ5	796 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	CYHR1	Q6ZMK1	362 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	ADGRF3	Q8IZF5	1079 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	EEF1AKMT1	Q8WVE0	214 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	UBXN4	Q92575	508 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	MRRF	Q96E11	262 aa	Known RBP	13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	VPS39	Q96JC1	886 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	SLC46A1	Q96NT5	459 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	CD180	Q99467	661 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	MAP3K3	Q99759	626 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	OLFM1	Q99784	485 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	CDC42EP4	Q9H3Q1	356 aa	Known RBP	13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	ACTR10	Q9NZ32	417 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	OR6C2	Q9NZP2	312 aa		13.55	□□□□□ -0.24
CCM2-217	ENST00000492883	PIPSL	A2A3N6	862 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	ISM1	B1AKI9	464 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	EIF3F	O00303	357 aa	Predicted RBP	13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	PSIP1	O75475	530 aa	Known RBP	13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	SLU7	O95391	586 aa	Known RBP	13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	SYF2	O95926	243 aa	Known RBP	13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	C1QA	P02745	245 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	CHRM5	P08912	532 aa	Predicted RBP	13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	ANKRD34C	P0C6C1	535 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	CDH3	P22223	829 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	PRDX3	P30048	256 aa	Known RBP	13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	SPR	P35270	261 aa	Predicted RBP	13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	RAB28	P51157	221 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	KPNA2	P52292	529 aa	Known RBP	13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	PGGT1B	P53609	377 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	TUBB4B	P68371	445 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	NAB1	Q13506	487 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	USP10	Q14694	798 aa	Known RBP	13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	CCSMST1	Q4G0I0	132 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	TMEM164	Q5U3C3	297 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	PRSS42	Q7Z5A4	293 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	MYO1H	Q8N1T3	1032 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	ASB11	Q8WXH4	323 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	LINGO1	Q96FE5	620 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	PRR11	Q96HE9	360 aa	Predicted RBP	13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	CNTNAP3B	Q96NU0	1288 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	IL17F	Q96PD4	163 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	CYTH2	Q99418	400 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	RAB11FIP5	Q9BXF6	653 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	CNTNAP3	Q9BZ76	1288 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	ZNF768	Q9H5H4	540 aa	Known RBP	13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	SYTL2	Q9HCH5	934 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	OCIAD1	Q9NX40	245 aa		13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	MTO1	Q9Y2Z2	717 aa	Known RBP	13.54	□□□□□ -0.24
CCM2-217	ENST00000492883	IGHV5-51	A0A0C4DH38	117 aa		13.53	□□□□□ -0.24
CCM2-217	ENST00000492883	TMEM8B	A6NDV4	472 aa		13.53	□□□□□ -0.24
CCM2-217	ENST00000492883	TLCD2	A6NGC4	264 aa		13.53	□□□□□ -0.24

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