RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 AFTPHQ6ULP2 937 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 CDHR3Q6ZTQ4 885 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 APLFQ8IW19 511 aaPredicted RBP16.7■□□□□ 0.26
SGMS1-204ENST00000492601 CCDC89Q8N998 374 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 OR4L1Q8NH43 312 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 LRFN5Q96NI6 719 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 RANBP9Q96S59 729 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 SLC7A5P2Q9GIP4 190 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 SYTL2Q9HCH5 934 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 CASS4Q9NQ75 786 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 PCMTD2Q9NV79 361 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 SPHK1Q9NYA1 384 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 SERTAD3Q9UJW9 196 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 SNX7Q9UNH6 387 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 APRTP07741 180 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 CHRM5P08912 532 aaPredicted RBP16.69■□□□□ 0.26
SGMS1-204ENST00000492601 ZSCAN5DPP0CG00 497 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 ATXN8OSP0DMR3 200 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 SHMT2P34897 504 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 ITGA1P56199 1179 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 FOXK1P85037 733 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 SEMA3AQ14563 771 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 RPS6KA1Q15418 735 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 DEFB110Q30KQ9 67 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 LYPLAL1Q5VWZ2 237 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 ZNF534Q76KX8 674 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 SYTL1Q8IYJ3 562 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 TBC1D21Q8IYX1 336 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 TEX19Q8NA77 164 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 THAP4Q8WY91 577 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 TTC1Q99614 292 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 FAM60AQ9NP50 221 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 POLG2Q9UHN1 485 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 TCAF1Q9Y4C2 921 aa16.69■□□□□ 0.26
SGMS1-204ENST00000492601 PCSK5Q92824 1860 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 E7EQ34 232 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 ZNF749O43361 778 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 RAB40ALP0C0E4 278 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 MSL3P1P0C860 447 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 PTGIRP43119 386 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 CCL11P51671 97 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 PRAMEP78395 509 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 ZIC1Q15915 447 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 FASTKD1Q53R41 847 aaKnown RBP16.68■□□□□ 0.26
SGMS1-204ENST00000492601 MEI1Q5TIA1 1274 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 FAM198BQ6UWH4 519 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 LDB1Q86U70 411 aaPredicted RBP16.68■□□□□ 0.26
SGMS1-204ENST00000492601 C19orf47Q8N9M1 422 aaKnown RBP16.68■□□□□ 0.26
SGMS1-204ENST00000492601 PPHLN1Q8NEY8 458 aaKnown RBP16.68■□□□□ 0.26
SGMS1-204ENST00000492601 OR5K2Q8NHB8 316 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 LKAAEAR1Q8TD35 194 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 N4BP2L2Q92802 583 aaPredicted RBP16.68■□□□□ 0.26
SGMS1-204ENST00000492601 OR2A14Q96R47 310 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 NLNQ9BYT8 704 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 ACSS2Q9NR19 701 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 PAK5Q9P286 719 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 TCFL5Q9UL49 500 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 RIMKLBQ9ULI2 386 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 PLAAQ9Y263 795 aa16.68■□□□□ 0.26
SGMS1-204ENST00000492601 DOCK10Q96BY6 2186 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 SHANK1Q9Y566 2161 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 USP9XQ93008 2570 aaPredicted RBP16.67■□□□□ 0.26
SGMS1-204ENST00000492601 MDC1Q14676 2089 aaKnown RBP16.67■□□□□ 0.26
SGMS1-204ENST00000492601 IQCF5A8MTL0 148 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 HCRTR1O43613 425 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 CAPN1P07384 714 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 CCR7P32248 378 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 RPL22P35268 128 aaKnown RBP16.67■□□□□ 0.26
SGMS1-204ENST00000492601 MLLT10P55197 1068 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 SESN2P58004 480 aaPredicted RBP16.67■□□□□ 0.26
SGMS1-204ENST00000492601 ACVR1Q04771 509 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 HSPA14Q0VDF9 509 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 SIX1Q15475 284 aaPredicted RBP16.67■□□□□ 0.26
SGMS1-204ENST00000492601 NLRP9Q7RTR0 991 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 VRK3Q8IV63 474 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 GPR135Q8IZ08 494 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 LMNTD1Q8N9Z9 388 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 FLVCR1-AS1Q8TAF5 88 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 ADAMTS17Q8TE56 1095 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 SPRTNQ9H040 489 aaPredicted RBP16.67■□□□□ 0.26
SGMS1-204ENST00000492601 ING2Q9H160 280 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 LZTFL1Q9NQ48 299 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 CHRAC1Q9NRG0 131 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 OR6C2Q9NZP2 312 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 CIDEBQ9UHD4 219 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 NUP210LQ5VU65 1888 aa16.67■□□□□ 0.26
SGMS1-204ENST00000492601 SPTAN1Q13813 2472 aaKnown RBP16.67■□□□□ 0.26
SGMS1-204ENST00000492601 A0A0J9YY10 115 aa16.66■□□□□ 0.26
SGMS1-204ENST00000492601 ISM1B1AKI9 464 aa16.66■□□□□ 0.26
SGMS1-204ENST00000492601 F8W8V4 182 aa16.66■□□□□ 0.26
SGMS1-204ENST00000492601 OR2B3O76000 313 aa16.66■□□□□ 0.26
SGMS1-204ENST00000492601 CRADDP78560 199 aa16.66■□□□□ 0.26
SGMS1-204ENST00000492601 PLOD1Q02809 727 aaPredicted RBP16.66■□□□□ 0.26
SGMS1-204ENST00000492601 KCTD19Q17RG1 926 aaPredicted RBP16.66■□□□□ 0.26
SGMS1-204ENST00000492601 FAM20CQ8IXL6 584 aa16.66■□□□□ 0.26
SGMS1-204ENST00000492601 KRT222Q8N1A0 295 aa16.66■□□□□ 0.26
SGMS1-204ENST00000492601 CFAP61Q8NHU2 1237 aa16.66■□□□□ 0.26
SGMS1-204ENST00000492601 TCTN2Q96GX1 697 aa16.66■□□□□ 0.26
SGMS1-204ENST00000492601 SLC25A23Q9BV35 468 aa16.66■□□□□ 0.26
SGMS1-204ENST00000492601 AP1M1Q9BXS5 423 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms