RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 CD200R1Q8TD46 325 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 UBXN4Q92575 508 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 FGF11Q92914 225 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 MAP3K3Q99759 626 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 OCIAD1Q9NX40 245 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 NSMCE4AQ9NXX6 385 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TAS2R13Q9NYV9 303 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 MTRF1LQ9UGC7 380 aaKnown RBP15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TRMT6Q9UJA5 497 aaKnown RBP15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 PLAGL1Q9UM63 463 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 RUVBL2Q9Y230 463 aaKnown RBP15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 PCDHGA7Q9Y5G6 932 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 NFS1Q9Y697 457 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 KNTC1P50748 2209 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 KIF26BQ2KJY2 2108 aa15.8■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CEP295Q9C0D2 2601 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 C2orf74A8MZ97 194 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TAF4O00268 1085 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 BTN3A3O00478 584 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 MATN4O95460 622 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 C1orf105O95561 183 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TPBGLP0DKB5 382 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ENO3P13929 434 aaPredicted RBP15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 PKLRP30613 574 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CCNFP41002 786 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 BDKRB1P46663 353 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 PCBP4P57723 403 aaKnown RBP15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CUL1Q13616 776 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 C3orf62Q6ZUJ4 267 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 NEK10Q6ZWH5 1172 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 STRA8Q7Z7C7 330 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ADGRF3Q8IZF5 1079 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 BMPERQ8N8U9 685 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 GPATCH11Q8N954 259 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 KLHL6Q8WZ60 621 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CDKL2Q92772 493 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 INPP5DQ92835 1189 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 USP7Q93009 1102 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TAAR9Q96RI9 348 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SLC39A1Q9NY26 324 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ACTR10Q9NZ32 417 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 OR6C2Q9NZP2 312 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SEMA5BQ9P283 1151 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 POMT2Q9UKY4 750 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 RAXQ9Y2V3 346 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 PSAT1Q9Y617 370 aa15.79■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 IGHV5-51A0A0C4DH38 117 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TCRBV9S1A1TA0A576 114 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 PIPSLA2A3N6 862 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 EIF3FO00303 357 aaPredicted RBP15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 NVLO15381 856 aaKnown RBP15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 MPC1LP0DKB6 136 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CBSLP0DN79 551 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SLC5A2P31639 672 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CBSP35520 551 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 RAB28P51157 221 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CDKN2DP55273 166 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 RAB15P59190 212 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 GPX6P59796 221 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TIAL1Q01085 375 aaKnown RBP eCLIP15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 MC2RQ01718 297 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TMEM164Q5U3C3 297 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 HECTD2Q5U5R9 776 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 FAM45BPQ6NSW5 357 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CEP128Q6ZU80 1094 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CYS1Q717R9 158 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 KMT5CQ86Y97 462 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CPNE9Q8IYJ1 553 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CARFQ8N187 725 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 FAM45AQ8TCE6 357 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 MAGEC3Q8TD91 643 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 IFT81Q8WYA0 676 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 RAB11FIP5Q9BXF6 653 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 B3GNT4Q9C0J1 378 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SMYD2Q9NRG4 433 aa15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SIDT1Q9NXL6 827 aaKnown RBP15.78■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 C9orf172C9J069 976 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 RASGRF2O14827 1237 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 PRAMEF10O60809 474 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 PSIP1O75475 530 aaKnown RBP15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SPAG6O75602 509 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CHRM5P08912 532 aaPredicted RBP15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 NELFEP18615 380 aaKnown RBP15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CD9P21926 228 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CDH3P22223 829 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 MCM3P25205 808 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 PRDX3P30048 256 aaKnown RBP15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 STX2P32856 288 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SKIV2L2P42285 1042 aaKnown RBP15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 GRB7Q14451 532 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 LRRC8EQ6NSJ5 796 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ZC3HC1Q86WB0 502 aaKnown RBP15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SPNS2Q8IVW8 549 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 RAD51AP1Q96B01 352 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ELMO2Q96JJ3 720 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SLC41A2Q96JW4 573 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 FMO2Q99518 471 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 MENTQ9BUN1 341 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 DDA1Q9BW61 102 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TSPYL1Q9H0U9 437 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms