RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 KRT33BQ14525 404 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 SUZ12Q15022 739 aaKnown RBP18.14■□□□□ 0.49
MCF2L-230ENST00000491028 PHKG1Q16816 387 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 INAVAQ3KP66 663 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.14■□□□□ 0.49
MCF2L-230ENST00000491028 CDKL4Q5MAI5 379 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 ZCCHC8Q6NZY4 707 aaKnown RBP18.14■□□□□ 0.49
MCF2L-230ENST00000491028 DUS1LQ6P1R4 473 aaKnown RBP18.14■□□□□ 0.49
MCF2L-230ENST00000491028 C16orf46Q6P387 395 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 GATAD2AQ86YP4 633 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 GPSM1Q86YR5 675 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 ARL10Q8N8L6 244 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 GPR156Q8NFN8 814 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 OR5AR1Q8NGP9 310 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 SLC37A2Q8TED4 501 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 DLG3Q92796 817 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 RAD51AP1Q96B01 352 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 HIST1H2AHQ96KK5 128 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 HIST1H2AJQ99878 128 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 H2AFJQ9BTM1 129 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 EDEM2Q9BV94 578 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 NUDT4Q9NZJ9 180 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 TMCO1Q9UM00 188 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 KNL1Q8NG31 2342 aa18.14■□□□□ 0.49
MCF2L-230ENST00000491028 TMEM120BA0PK00 339 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 TARM1B6A8C7 271 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 H3BQF6 201 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 TK2O00142 265 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 MYO1CO00159 1063 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 VIPP01282 170 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 HPDP32754 393 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-230ENST00000491028 RPA3P35244 121 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-230ENST00000491028 FASLGP48023 281 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 PPP2R2AP63151 447 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 SLC14A1Q13336 389 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 TGFBIQ15582 683 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 C14orf28Q4W4Y0 310 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 PRR23CQ6ZRP0 262 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 TMEM151AQ8N4L1 468 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 PHC3Q8NDX5 983 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 PATE1Q8WXA2 126 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 SELENOSQ9BQE4 189 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 HGH1Q9BTY7 390 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 KIR3DX1Q9H7L2 352 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 PARD6AQ9NPB6 346 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 SPATA7Q9P0W8 599 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 SLC17A7Q9P2U7 560 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 CPNE7Q9UBL6 633 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 MUC6Q6W4X9 2439 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 VPS13AQ96RL7 3174 aa18.13■□□□□ 0.49
MCF2L-230ENST00000491028 SUPT3HB4E1H0 165 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 SMIM24O75264 130 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 SUPT3HO75486 399 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 S100BP04271 92 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-230ENST00000491028 ANXA5P08758 320 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 TPBGLP0DKB5 382 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 TAC1P20366 129 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 NR1D1P20393 614 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 HHEXQ03014 270 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 TCAIMQ8N3R3 496 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 RAB42Q8N4Z0 105 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 CCDC63Q8NA47 563 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 PDPRQ8NCN5 879 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 OR9A1PQ8NGU1 263 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 CCDC138Q96M89 665 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 CAMK1GQ96NX5 476 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 FAM111AQ96PZ2 611 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 RAB11FIP5Q9BXF6 653 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 SLC40A1Q9NP59 571 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 TMEM9BQ9NQ34 198 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 UTP6Q9NYH9 597 aaKnown RBP18.12■□□□□ 0.49
MCF2L-230ENST00000491028 NKIRAS1Q9NYS0 192 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 NCKIPSDQ9NZQ3 722 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 SIRPGQ9P1W8 387 aa18.12■□□□□ 0.49
MCF2L-230ENST00000491028 CPSF2Q9P2I0 782 aaKnown RBP18.12■□□□□ 0.49
MCF2L-230ENST00000491028 TRBV23OR9-2A0A075B6M9 112 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 UBXN8O00124 270 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 CDX4O14627 284 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-230ENST00000491028 FLRT2O43155 660 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 SBK3P0C264 359 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 MTHFD2P13995 350 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 HSD17B2P37059 387 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 GRK6P43250 576 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 ETV4P43268 484 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 KCNC1P48547 511 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 MAZP56270 477 aaKnown RBP18.11■□□□□ 0.49
MCF2L-230ENST00000491028 NHLH1Q02575 133 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 GRB7Q14451 532 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-230ENST00000491028 DBX2Q6ZNG2 339 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 SLC35F3Q8IY50 421 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 ARL14Q8N4G2 192 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 FAM181AQ8N9Y4 354 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 KYQ8NBH2 561 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 ARMC2Q8NEN0 867 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 ATL1Q8WXF7 558 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 EXT2Q93063 718 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 SH3KBP1Q96B97 665 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 CCDC126Q96EE4 140 aa18.11■□□□□ 0.49
MCF2L-230ENST00000491028 EGFL8Q99944 293 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms