RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 KIR3DL1P43629 444 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 ACSM2AQ08AH3 577 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 ACSM2BQ68CK6 577 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 FAM83AQ86UY5 434 aa11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 FAM193BQ96PV7 902 aaPredicted RBP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 GTPBP2Q9BX10 602 aaKnown RBP11.09□□□□□ -0.63
CRNKL1-204ENST00000490910 BCORQ6W2J9 1755 aa11.08□□□□□ -0.63
CRNKL1-204ENST00000490910 NT5C1B-RDH14C9J2C7 533 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 PER2O15055 1255 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 MATN3O15232 486 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 MPZL2O60487 215 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 MITFO75030 526 aaPredicted RBP11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 TTPAP49638 278 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 CRY2Q49AN0 593 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 PAGE3Q5JUK9 113 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 C6orf136Q5SQH8 315 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 SLX4IPQ5VYV7 408 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 SIGIRRQ6IA17 410 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 DOK6Q6PKX4 331 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 GET4Q7L5D6 327 aaPredicted RBP11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 FAM83FQ8NEG4 500 aaPredicted RBP11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 OR8J3Q8NGG0 315 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 SETD6Q8TBK2 473 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 SMARCD1Q96GM5 515 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 KLHL5Q96PQ7 755 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 FBXO8Q9NRD0 319 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 CDV3Q9UKY7 258 aaKnown RBP11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 PCDHGB3Q9Y5G1 929 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 SLC30A4O14863 429 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 DFNA5O60443 496 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 RPP40O75818 363 aaKnown RBP11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 ZNF7P17097 686 aaPredicted RBP11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 BAG6P46379 1132 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 OR3A3P47888 321 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 PTPN5P54829 565 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 RACK1P63244 317 aaKnown RBP11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 SH3BP2P78314 561 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 BCL2A1Q16548 175 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 SLC10A6Q3KNW5 377 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 SMUG1Q53HV7 270 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 LAPTM4BQ86VI4 370 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 MIB1Q86YT6 1006 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 NSUN5Q96P11 429 aaKnown RBP11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 SLC25A51Q9H1U9 297 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 NPAP1Q9NZP6 1156 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 MBD2Q9UBB5 411 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 RGS17Q9UGC6 210 aaPredicted RBP11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 ZNF142P52746 1687 aaPredicted RBP11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 FAM92AA1XBS5 289 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 SYNDIG1LA6NDD5 238 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 OR51F1A6NGY5 319 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 KERAO60938 352 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 CAPN15O75808 1086 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 FGF1P05230 155 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 PKMP14618 531 aaKnown RBP11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 GGT1P19440 569 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 TGM1P22735 817 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 GGT5P36269 586 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 RPP38P78345 283 aaKnown RBP11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 CDC20Q12834 499 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 IQCCQ4KMZ1 466 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 NRARPQ7Z6K4 114 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 PLCZ1Q86YW0 608 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 UXS1Q8NBZ7 420 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 TRPV1Q8NER1 839 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 POF1BQ8WVV4 589 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 GTF2H4Q92759 462 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 CCDC120Q96HB5 630 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 CDK15Q96Q40 435 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 HAPLN2Q9GZV7 340 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 KLHL1Q9NR64 748 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 PIGVQ9NUD9 493 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 EIF3KQ9UBQ5 218 aaKnown RBP11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 CMAHPQ9Y471 501 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 RIPK3Q9Y572 518 aa11.08□□□□□ -0.64
CRNKL1-204ENST00000490910 SIPA1L3O60292 1781 aaPredicted RBP11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 ANXA8P13928 327 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 POU2F1P14859 743 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 ARSAP15289 507 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 RYKP34925 604 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 CDH12P55289 794 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 ST3GAL4Q11206 333 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 AQP6Q13520 282 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 SYPL2Q5VXT5 272 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 WSCD1Q658N2 575 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 PDE12Q6L8Q7 609 aaKnown RBP11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 C11orf88Q6PI97 169 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 TSPYL5Q86VY4 417 aaPredicted RBP11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 KIF18BQ86Y91 864 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 TIGD4Q8IY51 512 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 CYP4Z2PQ8N1L4 340 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 MAELQ96JY0 434 aaKnown RBP11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 CAMKK2Q96RR4 588 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 LPIN3Q9BQK8 851 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 TINF2Q9BSI4 451 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 NMRK2Q9NPI5 230 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 THUMPD1Q9NXG2 353 aaKnown RBP11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 CLCA3PQ9Y6N3 262 aa11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 MYH14Q7Z406 1995 aaKnown RBP11.07□□□□□ -0.64
CRNKL1-204ENST00000490910 GABRDO14764 452 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms