RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 BLKP51451 505 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 SRP54P61011 504 aaKnown RBP7.43□□□□□ -1.22
CLDN1-202ENST00000490800 GABREP78334 506 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 GUCY1A3Q02108 690 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 CACNG1Q06432 222 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 NFATC4Q14934 902 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 ELOCQ15369 112 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 CHRNA6Q15825 494 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 ALG11Q2TAA5 492 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 ZRANB3Q5FWF4 1079 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 RBM20Q5T481 1227 aaKnown RBP7.43□□□□□ -1.22
CLDN1-202ENST00000490800 TTC19Q6DKK2 380 aaPredicted RBP7.43□□□□□ -1.22
CLDN1-202ENST00000490800 FAM151BQ6UXP7 276 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 LIPIQ6XZB0 460 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 CDHR3Q6ZTQ4 885 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 CHSY3Q70JA7 882 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 HSD11B1LQ7Z5J1 315 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 CMC1Q7Z7K0 106 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 SDCCAG8Q86SQ7 713 aaPredicted RBP7.43□□□□□ -1.22
CLDN1-202ENST00000490800 SPACA3Q8IXA5 215 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 FSTL5Q8N475 847 aaPredicted RBP7.43□□□□□ -1.22
CLDN1-202ENST00000490800 GPR26Q8NDV2 337 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 MGARPQ8TDB4 240 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 LPGAT1Q92604 370 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 FUBP1Q96AE4 644 aaKnown RBP7.43□□□□□ -1.22
CLDN1-202ENST00000490800 ELMO2Q96JJ3 720 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 ZNF578Q96N58 590 aaPredicted RBP7.43□□□□□ -1.22
CLDN1-202ENST00000490800 CAPS2Q9BXY5 557 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 C12orf65Q9H3J6 166 aaKnown RBP7.43□□□□□ -1.22
CLDN1-202ENST00000490800 PRORYQ9H606 182 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 CAB39LQ9H9S4 337 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 POLR1BQ9H9Y6 1135 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 MRPL40Q9NQ50 206 aaKnown RBP7.43□□□□□ -1.22
CLDN1-202ENST00000490800 SNX15Q9NRS6 342 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 PCMTD2Q9NV79 361 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 NKIRAS1Q9NYS0 192 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 SLC39A10Q9ULF5 831 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 PADI4Q9UM07 663 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 PCDHGB7Q9Y5F8 929 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 ENTPD2Q9Y5L3 495 aa7.43□□□□□ -1.22
CLDN1-202ENST00000490800 ZNF106Q9H2Y7 1883 aaKnown RBP7.43□□□□□ -1.22
CLDN1-202ENST00000490800 ATRXP46100 2492 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 IGSF10Q6WRI0 2623 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 TRBV5-4A0A0C4DH59 114 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 GLYATL1P3A0A0U1RQE8 302 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 A0A1W2PNU3 283 aaPredicted RBP7.42□□□□□ -1.22
CLDN1-202ENST00000490800 TMEM202A6NGA9 273 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 EIF4E1BA6NMX2 242 aaKnown RBP7.42□□□□□ -1.22
CLDN1-202ENST00000490800 SHISA8B8ZZ34 492 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 M0R082 166 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 COPEO14579 308 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 PHGDHO43175 533 aaKnown RBP7.42□□□□□ -1.22
CLDN1-202ENST00000490800 GPR39O43194 453 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 OIP5O43482 229 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 RRP9O43818 475 aaKnown RBP7.42□□□□□ -1.22
CLDN1-202ENST00000490800 SHOX2O60902 331 aaPredicted RBP7.42□□□□□ -1.22
CLDN1-202ENST00000490800 NDUFS3O75489 264 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 SRP72O76094 671 aaKnown RBP7.42□□□□□ -1.22
CLDN1-202ENST00000490800 ZWINTO95229 277 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 RASGRP1O95267 797 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 PRAMEF1O95521 474 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 C2P06681 752 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 CELA3AP09093 270 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 GM2AP17900 193 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 ITGALP20701 1170 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 CRHR1P34998 444 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 PGGT1BP53609 377 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 TAS2R39P59534 338 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 GNGT1P63211 74 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 CXADRP78310 365 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 TIAL1Q01085 375 aaKnown RBP eCLIP7.42□□□□□ -1.22
CLDN1-202ENST00000490800 POU4F1Q01851 419 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 TLE3Q04726 772 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 ILF2Q12905 390 aaKnown RBP7.42□□□□□ -1.22
CLDN1-202ENST00000490800 ARHGEF7Q14155 803 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 USP10Q14694 798 aaKnown RBP7.42□□□□□ -1.22
CLDN1-202ENST00000490800 ACOX1Q15067 660 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 ZKSCAN8Q15776 578 aaPredicted RBP7.42□□□□□ -1.22
CLDN1-202ENST00000490800 C3orf38Q5JPI3 329 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 HECTD2Q5U5R9 776 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 ZNF549Q6P9A3 640 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 LVRNQ6Q4G3 990 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 RBM44Q6ZP01 1051 aaKnown RBP7.42□□□□□ -1.22
CLDN1-202ENST00000490800 C8orf86Q6ZUL3 223 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 TAS2R42Q7RTR8 314 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 SNX20Q7Z614 316 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 TECPR1Q7Z6L1 1165 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 CLEC14AQ86T13 490 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 CEP97Q8IW35 865 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 PELI3Q8N2H9 469 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 IL22RA1Q8N6P7 574 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 GPATCH11Q8N954 259 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 ZNF248Q8NDW4 579 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 ZNF417Q8TAU3 575 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 TCP10LQ8TDR4 215 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 NAT6Q93015 286 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 WDR92Q96MX6 357 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 SLC46A1Q96NT5 459 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 PLEKHG4BQ96PX9 1271 aa7.42□□□□□ -1.22
CLDN1-202ENST00000490800 ZNF587Q96SQ5 575 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms