RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	SCN2A	Q99250	2005 aa		18.03	■□□□□ 0.48
C4A-256	ENST00000490663		H3BMM5	538 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	NDC80	O14777	642 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	DXO	O77932	396 aa	Known RBP	18.02	■□□□□ 0.48
C4A-256	ENST00000490663	AHSG	P02765	367 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	ITGA2B	P08514	1039 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	PVR	P15151	417 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	ADAR	P55265	1226 aa	Known RBP	18.02	■□□□□ 0.48
C4A-256	ENST00000490663	TIAL1	Q01085	375 aa	Known RBP eCLIP	18.02	■□□□□ 0.48
C4A-256	ENST00000490663	GBX1	Q14549	363 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	ANKS6	Q68DC2	871 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	ARMC6	Q6NXE6	501 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	AMIGO1	Q86WK6	493 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	ZFAND4	Q86XD8	727 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	CNTN4	Q8IWV2	1026 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	LMNTD2	Q8IXW0	634 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	CPNE9	Q8IYJ1	553 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	TBC1D21	Q8IYX1	336 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	ADGRF3	Q8IZF5	1079 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	BMPER	Q8N8U9	685 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	MNS1	Q8NEH6	495 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	NBEA	Q8NFP9	2946 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	PYROXD1	Q8WU10	500 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	ELMO2	Q96JJ3	720 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	THSD1	Q9NS62	852 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	SLC39A1	Q9NY26	324 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	SPHK1	Q9NYA1	384 aa		18.02	■□□□□ 0.48
C4A-256	ENST00000490663	TUBB4A	P04350	444 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	MCM3	P25205	808 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	ITPKB	P27987	946 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	PEBP1	P30086	187 aa	Known RBP	18.01	■□□□□ 0.47
C4A-256	ENST00000490663	CDKN2D	P55273	166 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	PLOD1	Q02809	727 aa	Predicted RBP	18.01	■□□□□ 0.47
C4A-256	ENST00000490663	MGAT5	Q09328	741 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	GRB7	Q14451	532 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	KLHL38	Q2WGJ6	581 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	KLHL35	Q6PF15	583 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	PRSS42	Q7Z5A4	293 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	CLEC14A	Q86T13	490 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	FAM20C	Q8IXL6	584 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	PALM2	Q8IXS6	379 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	LSMEM2	Q8N112	164 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	GPATCH11	Q8N954	259 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	CD200R1	Q8TD46	325 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	ZFPM2	Q8WW38	1151 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	FGF11	Q92914	225 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	ZDHHC12	Q96GR4	267 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	CRELD1	Q96HD1	420 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	ZNF578	Q96N58	590 aa	Predicted RBP	18.01	■□□□□ 0.47
C4A-256	ENST00000490663	TFB2M	Q9H5Q4	396 aa	Known RBP	18.01	■□□□□ 0.47
C4A-256	ENST00000490663	ZDHHC18	Q9NUE0	388 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	SIDT1	Q9NXL6	827 aa	Known RBP	18.01	■□□□□ 0.47
C4A-256	ENST00000490663	ZFAT	Q9P243	1243 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	EPHA6	Q9UF33	1036 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	B3GALT1	Q9Y5Z6	326 aa		18.01	■□□□□ 0.47
C4A-256	ENST00000490663	SCN3A	Q9NY46	2000 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	CXorf49	A8MYA2	514 aa	Predicted RBP	18	■□□□□ 0.47
C4A-256	ENST00000490663	KPNA5	O15131	536 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	EBLN1	P0CF75	366 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	PKLR	P30613	574 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	EIF2S3	P41091	472 aa	Known RBP	18	■□□□□ 0.47
C4A-256	ENST00000490663	PCBP4	P57723	403 aa	Known RBP	18	■□□□□ 0.47
C4A-256	ENST00000490663	GPX6	P59796	221 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	FOXM1	Q08050	763 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	PRKAA1	Q13131	559 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	COL9A2	Q14055	689 aa	Predicted RBP	18	■□□□□ 0.47
C4A-256	ENST00000490663	EFTUD2	Q15029	972 aa	Known RBP eCLIP	18	■□□□□ 0.47
C4A-256	ENST00000490663	TGIF1	Q15583	401 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	C19orf48	Q6RUI8	117 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	IGF2-AS	Q6U949	168 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	UNC5D	Q6UXZ4	953 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	PIWIL4	Q7Z3Z4	852 aa	Known RBP	18	■□□□□ 0.47
C4A-256	ENST00000490663	DCUN1D3	Q8IWE4	304 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	SNIP1	Q8TAD8	396 aa	Known RBP	18	■□□□□ 0.47
C4A-256	ENST00000490663	RAB33B	Q9H082	229 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	ZNF768	Q9H5H4	540 aa	Known RBP	18	■□□□□ 0.47
C4A-256	ENST00000490663	ACTR10	Q9NZ32	417 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	POMT2	Q9UKY4	750 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	SEC16A	O15027	2179 aa		18	■□□□□ 0.47
C4A-256	ENST00000490663	TLCD2	A6NGC4	264 aa		17.99	■□□□□ 0.47
C4A-256	ENST00000490663	EIF3H	O15372	352 aa	Known RBP eCLIP	17.99	■□□□□ 0.47
C4A-256	ENST00000490663	VPS26A	O75436	327 aa		17.99	■□□□□ 0.47
C4A-256	ENST00000490663	C1orf105	O95561	183 aa		17.99	■□□□□ 0.47
C4A-256	ENST00000490663	CHRM5	P08912	532 aa	Predicted RBP	17.99	■□□□□ 0.47
C4A-256	ENST00000490663	ANKRD34C	P0C6C1	535 aa		17.99	■□□□□ 0.47
C4A-256	ENST00000490663	SAT1	P21673	171 aa		17.99	■□□□□ 0.47
C4A-256	ENST00000490663	CDH3	P22223	829 aa		17.99	■□□□□ 0.47
C4A-256	ENST00000490663	SHMT2	P34897	504 aa		17.99	■□□□□ 0.47
C4A-256	ENST00000490663	MAGEA4	P43358	317 aa		17.99	■□□□□ 0.47
C4A-256	ENST00000490663	ERVPABLB-1	P60509	514 aa		17.99	■□□□□ 0.47
C4A-256	ENST00000490663	CAV1	Q03135	178 aa		17.99	■□□□□ 0.47
C4A-256	ENST00000490663	SRSF6	Q13247	344 aa	Known RBP	17.99	■□□□□ 0.47
C4A-256	ENST00000490663	TUBB2A	Q13885	445 aa		17.99	■□□□□ 0.47
C4A-256	ENST00000490663	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	17.99	■□□□□ 0.47
C4A-256	ENST00000490663	STRA8	Q7Z7C7	330 aa		17.99	■□□□□ 0.47
C4A-256	ENST00000490663	LINC01555	Q8NAE3	123 aa		17.99	■□□□□ 0.47
C4A-256	ENST00000490663	HNRNPLL	Q8WVV9	542 aa	Known RBP	17.99	■□□□□ 0.47
C4A-256	ENST00000490663	IFT81	Q8WYA0	676 aa		17.99	■□□□□ 0.47
C4A-256	ENST00000490663	SEC14L1	Q92503	715 aa		17.99	■□□□□ 0.47
C4A-256	ENST00000490663	KCNJ9	Q92806	393 aa		17.99	■□□□□ 0.47

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms