RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 AP1M1Q9BXS5 423 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 POLDIP3Q9BY77 421 aaKnown RBP6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 GSX2Q9BZM3 304 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 SLC7A5P2Q9GIP4 190 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 FAM83DQ9H4H8 585 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 LRFN1Q9P244 771 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 DHCR7Q9UBM7 475 aaKnown RBP6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 GPN3Q9UHW5 284 aaPredicted RBP6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 CDC23Q9UJX2 597 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 FZD10Q9ULW2 581 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 LUC7L2Q9Y383 392 aaKnown RBP6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 MPDZO75970 2070 aa6.84□□□□□ -1.31
PDLIM1-203ENST00000490391 RGSL1A5PLK6 1076 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 DFFAO00273 331 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 MTX2O75431 263 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 SLC25A14O95258 325 aaPredicted RBP6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 ATE1O95260 518 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 LSM8O95777 96 aaKnown RBP6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 PRLP01236 227 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 TPOP07202 933 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 POLR2CP19387 275 aaPredicted RBP6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 CDH3P22223 829 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 HTR7P34969 479 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 HALP42357 657 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 TPI1P60174 286 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 DEFB113Q30KQ7 82 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 ZNF569Q5MCW4 686 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 ZNF658Q5TYW1 1059 aaPredicted RBP6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 TTI2Q6NXR4 508 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 PAMR1Q6UXH9 720 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 FAM83HQ6ZRV2 1179 aaPredicted RBP6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 FGD2Q7Z6J4 655 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 SIAH3Q8IW03 269 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 CIARTQ8N365 385 aaPredicted RBP6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 LILRB4Q8NHJ6 448 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 TEKT4Q8WW24 435 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 ZFPM2Q8WW38 1151 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 CPA5Q8WXQ8 436 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 GLYATL1Q969I3 302 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 EID2BQ96D98 161 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 GPATCH1Q9BRR8 931 aaKnown RBP6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 TRIM51Q9BSJ1 452 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 UCK2Q9BZX2 261 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 RNF32Q9H0A6 362 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 CLEC4MQ9H2X3 399 aaPredicted RBP6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 SIX2Q9NPC8 291 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 RASSF1Q9NS23 344 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 COQ3Q9NZJ6 369 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 IL17CQ9P0M4 197 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 PTGFRNQ9P2B2 879 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 SLC24A2Q9UI40 661 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 TMPRSS11EQ9UL52 423 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 PPT2Q9UMR5 302 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 L3MBTL1Q9Y468 752 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 AP1M2Q9Y6Q5 423 aa6.83□□□□□ -1.32
PDLIM1-203ENST00000490391 C1orf232A0A0U1RR37 186 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 FAM237BA0A1B0GVD1 139 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 FAM90A27PA6NNH2 459 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 CCP110O43303 1012 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 OR2B3O76000 313 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 USP1O94782 785 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 PRAMEF1O95521 474 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 WDPCPO95876 746 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 ONECUT2O95948 504 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 HPP00738 406 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 PRR35P0CG20 571 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 MTHFD1P11586 935 aaKnown RBP6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 PVRP15151 417 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 MMP8P22894 467 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 PRDX3P30048 256 aaKnown RBP6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 EPHB1P54762 984 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 AIF1P55008 147 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 DLX5P56178 289 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 TMPRSS15P98073 1019 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 PTP4A2Q12974 167 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 CAMK4Q16566 473 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 NKG7Q16617 165 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 CA9Q16790 459 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 C8orf34Q49A92 452 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 KRTCAP3Q53RY4 240 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 TBCELQ5QJ74 424 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 TAF3Q5VWG9 929 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 NAA35Q5VZE5 725 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 WDR59Q6PJI9 974 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 COX15Q7KZN9 410 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 CDC20BQ86Y33 519 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 GPR135Q8IZ08 494 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 ACRBPQ8NEB7 543 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 BRIX1Q8TDN6 353 aaKnown RBP6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 HDAC10Q969S8 669 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 FKBP10Q96AY3 582 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 NRTNQ99748 197 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 SPRTNQ9H040 489 aaPredicted RBP6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 KLHL25Q9H0H3 589 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 TSPAN10Q9H1Z9 355 aaPredicted RBP6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 SLC26A1Q9H2B4 701 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 WDR54Q9H977 334 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 MRM3Q9HC36 420 aaKnown RBP6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 FAM60AQ9NP50 221 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms