RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 DVL3Q92997 716 aaPredicted RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 LRFN5Q96NI6 719 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 WWC2-AS2Q96NR7 200 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 PLEKHG4BQ96PX9 1271 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 NAP1L3Q99457 506 aaPredicted RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 MNTQ99583 582 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 ERP44Q9BS26 406 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 PIMREGQ9BSJ6 248 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 C16orf70Q9BSU1 422 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 POLR3CQ9BUI4 534 aaPredicted RBP2.87□□□□□ -1.95
UBXN4-208ENST00000490163 POLKQ9UBT6 870 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 FBXL5Q9UKA1 691 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 AMFRQ9UKV5 643 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 TRAF3IP3Q9Y228 551 aa2.87□□□□□ -1.95
UBXN4-208ENST00000490163 KIF7Q2M1P5 1343 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 H0YIG0 161 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 CTAGE5O15320 804 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 SUV39H1O43463 412 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 SLC25A17O43808 307 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 RHBDL1O75783 438 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 BAG4O95429 457 aaKnown RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 MBD3O95983 291 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 LCATP04180 440 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 PLA2G4BP0C869 781 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 CD22P20273 847 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 GLRA2P23416 452 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 DGKAP23743 735 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 CCNCP24863 283 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 PPARGP37231 505 aaPredicted RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 PEX5P50542 639 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 SLURP1P55000 103 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 TROAPQ12815 778 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 ZSCAN26Q16670 478 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 ESCO2Q56NI9 601 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 XKR9Q5GH70 373 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 FAM69BQ5VUD6 431 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 AP1ARQ63HQ0 302 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 CD164L2Q6UWJ8 174 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 LEKR1Q6ZMV7 388 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 KRT27Q7Z3Y8 459 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 WDR49Q8IV35 697 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 KBTBD2Q8IY47 623 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 CLYBLQ8N0X4 340 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 RBMXL3Q8N7X1 1067 aaKnown RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 FAM184AQ8NB25 1140 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 NEK11Q8NG66 645 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 OR52B4Q8NGK2 314 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 HUS1BQ8NHY5 278 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 THAP6Q8TBB0 222 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 WASF1Q92558 559 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 DHX58Q96C10 678 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 NSMCE3Q96MG7 304 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 PRRX2Q99811 253 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 CPPED1Q9BRF8 314 aaPredicted RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 PLA2G12BQ9BX93 195 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 EPB41L5Q9HCM4 733 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 NMRK1Q9NWW6 199 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 RCC2Q9P258 522 aaKnown RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 ITGA11Q9UKX5 1188 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 TMED5Q9Y3A6 229 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 HEMK1Q9Y5R4 338 aaPredicted RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 TDRD15B5MCY1 1934 aaKnown RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 LY75O60449 1722 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 MRC1P22897 1456 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 GOLGA6L9A6NEM1 432 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 A6NL46 340 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 ZNF716A6NP11 495 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 PRR32B1ATL7 298 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 POC1B-GALNT4F8VUJ3 575 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 ZBTB43O43298 467 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 ALDOCP09972 364 aaKnown RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 ZNF735P0CB33 412 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 CD9P21926 228 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 ACRV1P26436 265 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 SLC16A2P36021 539 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 MAGEA9P43362 315 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 ACADVLP49748 655 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 ARSFP54793 590 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 SOX10P56693 466 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 IRX1P78414 480 aaPredicted RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 GCNT1Q02742 428 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 SPP2Q13103 211 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 SRSF9Q13242 221 aaKnown RBP eCLIP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 SNAPC1Q16533 368 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 DPYSL2Q16555 572 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 AARS2Q5JTZ9 985 aaKnown RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 ABHD17BQ5VST6 288 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 FRG2Q64ET8 278 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 TRIM65Q6PJ69 517 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 SLC36A4Q6YBV0 504 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 GDF7Q7Z4P5 450 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 DNAAF4Q8WXU2 420 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 CELF1Q92879 486 aaKnown RBP2.86□□□□□ -1.95
UBXN4-208ENST00000490163 C19orf60Q96EN9 201 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 ELMOD3Q96FG2 381 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 NLRP4Q96MN2 994 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 TEX101Q9BY14 249 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 ARRDC1-AS1Q9H2J1 176 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 KLHL31Q9H511 634 aa2.86□□□□□ -1.95
UBXN4-208ENST00000490163 IL1RAPL1Q9NZN1 696 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms