RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 PDZK1P1A8MUH7 402 aa20.34■□□□□ 0.85
SND1-214ENST00000489417 CCNT2O60583 730 aaKnown RBP20.34■□□□□ 0.85
SND1-214ENST00000489417 RPN2P04844 631 aa20.34■□□□□ 0.85
SND1-214ENST00000489417 RPL14P50914 215 aaKnown RBP20.34■□□□□ 0.85
SND1-214ENST00000489417 LCP2Q13094 533 aa20.34■□□□□ 0.85
SND1-214ENST00000489417 WDR45BQ5MNZ6 344 aa20.34■□□□□ 0.85
SND1-214ENST00000489417 ARMCX6Q7L4S7 300 aa20.34■□□□□ 0.85
SND1-214ENST00000489417 WDR75Q8IWA0 830 aaKnown RBP20.34■□□□□ 0.85
SND1-214ENST00000489417 RGL4Q8IZJ4 473 aa20.34■□□□□ 0.85
SND1-214ENST00000489417 CACNA2D3Q8IZS8 1091 aa20.34■□□□□ 0.85
SND1-214ENST00000489417 CCDC197Q8NCU1 140 aa20.34■□□□□ 0.85
SND1-214ENST00000489417 HGH1Q9BTY7 390 aa20.34■□□□□ 0.85
SND1-214ENST00000489417 SEMA4BQ9NPR2 832 aaPredicted RBP20.34■□□□□ 0.85
SND1-214ENST00000489417 OPTCQ9UBM4 332 aa20.34■□□□□ 0.85
SND1-214ENST00000489417 ZDHHC2Q9UIJ5 367 aa20.34■□□□□ 0.85
SND1-214ENST00000489417 WDR37Q9Y2I8 494 aa20.34■□□□□ 0.85
SND1-214ENST00000489417 K7EPI3 171 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 MYO1CO00159 1063 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 UBFD1O14562 309 aaKnown RBP20.33■□□□□ 0.84
SND1-214ENST00000489417 STK16O75716 305 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 MLYCDO95822 493 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 AK4P27144 223 aaPredicted RBP20.33■□□□□ 0.84
SND1-214ENST00000489417 SLC6A12P48065 614 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 HK2P52789 917 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 RBBP7Q16576 425 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 UAP1L1Q3KQV9 507 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 GOLGA7Q7Z5G4 137 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 C11orf74Q86VG3 221 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 PARGQ86W56 976 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 DCUN1D3Q8IWE4 304 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 TEX9Q8N6V9 391 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 PHC3Q8NDX5 983 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 OR5AR1Q8NGP9 310 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 OR9A1PQ8NGU1 263 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 C1orf216Q8TAB5 229 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 AGR3Q8TD06 166 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 C10orf82Q8WW14 230 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 GAB3Q8WWW8 586 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 C12orf66Q96MD2 445 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 INSM2Q96T92 566 aaPredicted RBP20.33■□□□□ 0.84
SND1-214ENST00000489417 ZBTB26Q9HCK0 441 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 STOX2Q9P2F5 926 aaPredicted RBP20.33■□□□□ 0.84
SND1-214ENST00000489417 DCTN4Q9UJW0 460 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 LRP4O75096 1905 aa20.33■□□□□ 0.84
SND1-214ENST00000489417 TLR4O00206 839 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 ACTR1BP42025 376 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 GDF5P43026 501 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 ACTR1AP61163 376 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 ILF3Q12906 894 aaKnown RBP eCLIP20.32■□□□□ 0.84
SND1-214ENST00000489417 GTF2H2Q13888 395 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 SH2D4BQ5SQS7 431 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 GTF2H2CQ6P1K8 395 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 LAYNQ6UX15 382 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 LRRC70Q7Z2Q7 622 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 PHACTR4Q8IZ21 702 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 KIRREL3Q8IZU9 778 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 OR5K2Q8NHB8 316 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 CCL4L1Q8NHW4 92 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 RAD51AP1Q96B01 352 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 SIKE1Q9BRV8 207 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 TRIT1Q9H3H1 467 aaKnown RBP20.32■□□□□ 0.84
SND1-214ENST00000489417 SLC32A1Q9H598 525 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 MID1IP1Q9NPA3 183 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 PRDM8Q9NQV8 689 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 CIDEBQ9UHD4 219 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 FBXO4Q9UKT5 387 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 ANGPTL3Q9Y5C1 460 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 CFAP20Q9Y6A4 193 aaKnown RBP20.32■□□□□ 0.84
SND1-214ENST00000489417 USH1CQ9Y6N9 552 aa20.32■□□□□ 0.84
SND1-214ENST00000489417 PPP6CO00743 305 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 IMPA1P29218 277 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 HALP42357 657 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 PIK3CGP48736 1102 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 BLKP51451 505 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 SH3BP2P78314 561 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 CLCA4Q14CN2 919 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 TCEA2Q15560 299 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 ZXDCQ2QGD7 858 aaPredicted RBP20.31■□□□□ 0.84
SND1-214ENST00000489417 PTCHD3Q3KNS1 767 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 ZNF542PQ5EBM4 170 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 DUS1LQ6P1R4 473 aaKnown RBP20.31■□□□□ 0.84
SND1-214ENST00000489417 AGTRAPQ6RW13 159 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 WASH2PQ6VEQ5 465 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 TBC1D21Q8IYX1 336 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 AFAP1L2Q8N4X5 818 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 FBXL6Q8N531 539 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 AGAP11Q8TF27 550 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 ATG10Q9H0Y0 220 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 TCEAL2Q9H3H9 227 aaPredicted RBP20.31■□□□□ 0.84
SND1-214ENST00000489417 KCNK13Q9HB14 408 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 WASH6PQ9NQA3 447 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 TBC1D29Q9UFV1 150 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 KLF15Q9UIH9 416 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 STK38LQ9Y2H1 464 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 ARL2BPQ9Y2Y0 163 aa20.31■□□□□ 0.84
SND1-214ENST00000489417 ZFC3H1O60293 1989 aaKnown RBP20.3■□□□□ 0.84
SND1-214ENST00000489417 A0A0G2JND7 137 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 SLCO1B7G3V0H7 640 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 WDR47O94967 919 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 SLC16A8O95907 504 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms