RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 UTP20O75691 2785 aaKnown RBP11.98□□□□□ -0.49
CPSF3-204ENST00000489403 SEC16AO15027 2179 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 A1L4Q6 167 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 LIN7AO14910 233 aaPredicted RBP11.97□□□□□ -0.49
CPSF3-204ENST00000489403 SNRNP200O75643 2136 aaKnown RBP11.97□□□□□ -0.49
CPSF3-204ENST00000489403 OR2B3O76000 313 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 AP2A2O94973 939 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 TJP3O95049 919 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 METTL18O95568 372 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 TPBGLP0DKB5 382 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 ACADLP28330 430 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 SHMT2P34897 504 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 CYLC1P35663 651 aaPredicted RBP11.97□□□□□ -0.49
CPSF3-204ENST00000489403 RWDD2BP57060 319 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 CACNG1Q06432 222 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 BRD3Q15059 726 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 SPA17Q15506 151 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 KYNUQ16719 465 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 MLIPQ5VWP3 458 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 HOOK3Q86VS8 718 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.97□□□□□ -0.49
CPSF3-204ENST00000489403 LRRC45Q96CN5 670 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 SNRNP40Q96DI7 357 aaKnown RBP11.97□□□□□ -0.49
CPSF3-204ENST00000489403 C19orf60Q96EN9 201 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 TCTN2Q96GX1 697 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 GBP5Q96PP8 586 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 C17orf62Q9BQA9 187 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 SPRTNQ9H040 489 aaPredicted RBP11.97□□□□□ -0.49
CPSF3-204ENST00000489403 LUC7LQ9NQ29 371 aaKnown RBP11.97□□□□□ -0.49
CPSF3-204ENST00000489403 PIH1D1Q9NWS0 290 aaKnown RBP11.97□□□□□ -0.49
CPSF3-204ENST00000489403 SMARCAL1Q9NZC9 954 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 C5AR2Q9P296 337 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 DHCR7Q9UBM7 475 aaKnown RBP11.97□□□□□ -0.49
CPSF3-204ENST00000489403 ASF1AQ9Y294 204 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 AP1M2Q9Y6Q5 423 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 DUSP10Q9Y6W6 482 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 NUP210LQ5VU65 1888 aa11.97□□□□□ -0.49
CPSF3-204ENST00000489403 PCM1Q15154 2024 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 A0A0J9YY10 115 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 CCDC78A2IDD5 438 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 OR51F1A6NGY5 319 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 SOWAHDA6NJG2 315 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 ZSCAN9O15535 394 aaPredicted RBP11.96□□□□□ -0.49
CPSF3-204ENST00000489403 KRT86O43790 486 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 CNOT3O75175 753 aaKnown RBP11.96□□□□□ -0.49
CPSF3-204ENST00000489403 CHRM5P08912 532 aaPredicted RBP11.96□□□□□ -0.49
CPSF3-204ENST00000489403 VARSP26640 1264 aaKnown RBP11.96□□□□□ -0.49
CPSF3-204ENST00000489403 PEBP1P30086 187 aaKnown RBP11.96□□□□□ -0.49
CPSF3-204ENST00000489403 FOLR3P41439 243 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 NSG1P42857 185 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 GDF10P55107 478 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 FOXL2P58012 376 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 ITIH4Q14624 930 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 SLC9A5Q14940 896 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 PARP6Q2NL67 630 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 PLEKHN1Q494U1 663 aaPredicted RBP11.96□□□□□ -0.49
CPSF3-204ENST00000489403 DCAF10Q5QP82 559 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 PACS1Q6VY07 963 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 NAPRTQ6XQN6 538 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 TMEM151BQ8IW70 566 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 TBC1D21Q8IYX1 336 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 IQCKQ8N0W5 287 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 ZNF655Q8N720 491 aaPredicted RBP11.96□□□□□ -0.49
CPSF3-204ENST00000489403 CLEC1AQ8NC01 280 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 OR5K2Q8NHB8 316 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 PRR7Q8TB68 274 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 PROKR1Q8TCW9 393 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 ELMO1Q92556 727 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 FER1L6-AS2Q96M78 137 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 IP6K3Q96PC2 410 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 CHRNA10Q9GZZ6 450 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 LRRC40Q9H9A6 602 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 IFT80Q9P2H3 777 aaPredicted RBP11.96□□□□□ -0.49
CPSF3-204ENST00000489403 NDOR1Q9UHB4 597 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 GPN3Q9UHW5 284 aaPredicted RBP11.96□□□□□ -0.49
CPSF3-204ENST00000489403 PLAGL1Q9UM63 463 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 CDYLQ9Y232 598 aa11.96□□□□□ -0.49
CPSF3-204ENST00000489403 TDRKHQ9Y2W6 561 aaKnown RBP11.96□□□□□ -0.49
CPSF3-204ENST00000489403 PTRH2Q9Y3E5 179 aaKnown RBP11.96□□□□□ -0.49
CPSF3-204ENST00000489403 SLC5A10A0PJK1 596 aa11.95□□□□□ -0.5
CPSF3-204ENST00000489403 MROH6A6NGR9 719 aa11.95□□□□□ -0.5
CPSF3-204ENST00000489403 BHMG1C9JSJ3 638 aaPredicted RBP11.95□□□□□ -0.5
CPSF3-204ENST00000489403 MASP2O00187 686 aa11.95□□□□□ -0.5
CPSF3-204ENST00000489403 QSOX1O00391 747 aa11.95□□□□□ -0.5
CPSF3-204ENST00000489403 ZNF189O75820 626 aaPredicted RBP11.95□□□□□ -0.5
CPSF3-204ENST00000489403 AP2A1O95782 977 aa11.95□□□□□ -0.5
CPSF3-204ENST00000489403 DDAH2O95865 285 aa11.95□□□□□ -0.5
CPSF3-204ENST00000489403 FTH1P02794 183 aa11.95□□□□□ -0.5
CPSF3-204ENST00000489403 PSMA3P25788 255 aa11.95□□□□□ -0.5
CPSF3-204ENST00000489403 MSNP26038 577 aaKnown RBP11.95□□□□□ -0.5
CPSF3-204ENST00000489403 FOXN2P32314 431 aa11.95□□□□□ -0.5
CPSF3-204ENST00000489403 CETN2P41208 172 aa11.95□□□□□ -0.5
CPSF3-204ENST00000489403 NAP1L1P55209 391 aaKnown RBP11.95□□□□□ -0.5
CPSF3-204ENST00000489403 DCDP81605 110 aaKnown RBP11.95□□□□□ -0.5
CPSF3-204ENST00000489403 MYBPC3Q14896 1274 aa11.95□□□□□ -0.5
CPSF3-204ENST00000489403 NR6A1Q15406 480 aa11.95□□□□□ -0.5
CPSF3-204ENST00000489403 SKOR2Q2VWA4 1001 aaPredicted RBP11.95□□□□□ -0.5
CPSF3-204ENST00000489403 MRPL14Q6P1L8 145 aaKnown RBP11.95□□□□□ -0.5
CPSF3-204ENST00000489403 ARHGEF18Q6ZSZ5 1173 aa11.95□□□□□ -0.5
CPSF3-204ENST00000489403 TMTC1Q8IUR5 882 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms