RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SLC38A8A6NNN8 435 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 USP2O75604 605 aaPredicted RBP17.3■□□□□ 0.36
NPHP4-209ENST00000489180 DAG1Q14118 895 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 SWI5Q1ZZU3 235 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 SLC35G5Q96KT7 338 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 DEFB118Q96PH6 123 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 DNAAF2Q9NVR5 837 aaKnown RBP17.3■□□□□ 0.36
NPHP4-209ENST00000489180 GABRDO14764 452 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 ECI2O75521 394 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 DBIP07108 87 aaKnown RBP17.3■□□□□ 0.36
NPHP4-209ENST00000489180 C8GP07360 202 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 PRKCHP24723 683 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 CEBPGP53567 150 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 NPTX1Q15818 432 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 RGMBQ6NW40 437 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 CLEC20AQ6ZU45 233 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 PHTF2Q8N3S3 785 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 GNRH1P01148 92 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 ALDH3A2P51648 485 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 DGKQP52824 942 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 KCNJ11Q14654 390 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 TEAD4Q15561 434 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 PMM1Q92871 262 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 TWNKQ96RR1 684 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 A0A0X1KG70 313 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 POP4O95707 220 aaKnown RBP17.29■□□□□ 0.36
NPHP4-209ENST00000489180 SELPP16109 830 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 CMPK1P30085 196 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 AP1S1P61966 158 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 LRP10Q7Z4F1 713 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 NKD1Q969G9 470 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 TMBIM1Q969X1 311 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 TTYH1Q9H313 450 aaPredicted RBP17.29■□□□□ 0.36
NPHP4-209ENST00000489180 MRTO4Q9UKD2 239 aaKnown RBP17.29■□□□□ 0.36
NPHP4-209ENST00000489180 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.29■□□□□ 0.36
NPHP4-209ENST00000489180 RSL1D1O76021 490 aaKnown RBP17.29■□□□□ 0.36
NPHP4-209ENST00000489180 OPN1SWP03999 348 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 UGT1A6P19224 532 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 UGT1A1P22309 533 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 UGT1A4P22310 534 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 UGT1A3P35503 534 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 TXNL4AP83876 142 aaKnown RBP17.29■□□□□ 0.36
NPHP4-209ENST00000489180 SLC10A7Q0GE19 358 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 SCARB2Q14108 478 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 ATP13A5Q4VNC0 1218 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 LINGO2Q7L985 606 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 FCRL5Q96RD9 977 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 YIPF4Q9BSR8 244 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 IFT27Q9BW83 186 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 GRIP1Q9Y3R0 1128 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 PLSCR1O15162 318 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 MID1O15344 667 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 PDPK1O15530 556 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 RBMXL2O75526 392 aaKnown RBP17.29■□□□□ 0.36
NPHP4-209ENST00000489180 SEC13P55735 322 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 SLC2A7Q6PXP3 512 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 TMC8Q8IU68 726 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 GLB1L3Q8NCI6 653 aaPredicted RBP17.29■□□□□ 0.36
NPHP4-209ENST00000489180 OR5AK3PQ8NH89 298 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 POLR2J2Q9GZM3 115 aaKnown RBP17.29■□□□□ 0.36
NPHP4-209ENST00000489180 PIGVQ9NUD9 493 aa17.29■□□□□ 0.36
NPHP4-209ENST00000489180 LRRC72A6NJI9 287 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 FAM159BA6NKW6 160 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 S100A6P06703 90 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 GNALP38405 381 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 AVPR1BP47901 424 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 OR2B6P58173 313 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 SNX20Q7Z614 316 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 OR10G2Q8NGC3 310 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 PMEPA1Q969W9 287 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 MAGEE1Q9HCI5 957 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 RUVBL1Q9Y265 456 aaKnown RBP17.28■□□□□ 0.36
NPHP4-209ENST00000489180 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.28■□□□□ 0.36
NPHP4-209ENST00000489180 ALPIP09923 528 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 NSG1P42857 185 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 DGKEP52429 567 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 STXBP1P61764 594 aaKnown RBP17.28■□□□□ 0.36
NPHP4-209ENST00000489180 ANO7Q6IWH7 933 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 RANBP3LQ86VV4 465 aaPredicted RBP17.28■□□□□ 0.36
NPHP4-209ENST00000489180 OR10Q1Q8NGQ4 319 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 TUBA8Q9NY65 449 aaPredicted RBP17.28■□□□□ 0.36
NPHP4-209ENST00000489180 RIMKLBQ9ULI2 386 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 K7EPI3 171 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 APODP05090 189 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 PDHA2P29803 388 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 RORCP51449 518 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 OGDHQ02218 1023 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 CSTF1Q05048 431 aaKnown RBP17.28■□□□□ 0.36
NPHP4-209ENST00000489180 RASSF5Q8WWW0 418 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 FATE1Q969F0 183 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 FZD8Q9H461 694 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 UCKL1Q9NWZ5 548 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 DKK3Q9UBP4 350 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 PRNPP04156 253 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 CYP11A1P05108 521 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 KELP23276 732 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 IQCCQ4KMZ1 466 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 CLEC12AQ5QGZ9 265 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 CCDC36Q8IYA8 594 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 OR8H3Q8N146 312 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms