RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 MAML1Q92585 1016 aa8.02□□□□□ -1.13
TRAPPC12-221ENST00000489032 RAB7BQ96AH8 199 aa8.02□□□□□ -1.13
TRAPPC12-221ENST00000489032 PBKQ96KB5 322 aa8.02□□□□□ -1.13
TRAPPC12-221ENST00000489032 ZNF641Q96N77 438 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC12-221ENST00000489032 OLFM3Q96PB7 478 aa8.02□□□□□ -1.13
TRAPPC12-221ENST00000489032 NUDCD1Q96RS6 583 aa8.02□□□□□ -1.13
TRAPPC12-221ENST00000489032 RBM15Q96T37 977 aaKnown RBP eCLIP8.02□□□□□ -1.13
TRAPPC12-221ENST00000489032 LGMNQ99538 433 aa8.02□□□□□ -1.13
TRAPPC12-221ENST00000489032 MGME1Q9BQP7 344 aa8.02□□□□□ -1.13
TRAPPC12-221ENST00000489032 GPR174Q9BXC1 333 aa8.02□□□□□ -1.13
TRAPPC12-221ENST00000489032 FRMD8P1Q9BZ68 369 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC12-221ENST00000489032 PCED1AQ9H1Q7 454 aa8.02□□□□□ -1.13
TRAPPC12-221ENST00000489032 NEUROG2Q9H2A3 272 aa8.02□□□□□ -1.13
TRAPPC12-221ENST00000489032 WSB2Q9NYS7 404 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC12-221ENST00000489032 SAR1BQ9Y6B6 198 aa8.02□□□□□ -1.13
TRAPPC12-221ENST00000489032 NYNRINQ9P2P1 1898 aaKnown RBP8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 TBC1D3DA0A087WVF3 549 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 TBC1D3IA0A087WXS9 549 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 TBC1D3EA0A087X179 549 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 TBC1D3KA0A087X1G2 549 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 TBC1D3FA6NER0 549 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 FAM47DPA6NHR8 397 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 C16orf96A6NNT2 1141 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 TBC1D3LB9A6J9 549 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 KCNK1O00180 336 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 INSIG1O15503 277 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 CEP104O60308 925 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 SOCS5O75159 536 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 PEX11BO96011 259 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 TUBBP07437 444 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 CTSLP07711 333 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 SERPINF2P08697 491 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 TBC1D3HP0C7X1 549 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 CD59P13987 128 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 PRLRP16471 622 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 GKP32189 559 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 SUOXP51687 545 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 IFI35P80217 286 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 CFHR1Q03591 330 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 CNTN1Q12860 1018 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 GBX1Q14549 363 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 TEX44Q53QW1 395 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 SLC45A4Q5BKX6 768 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 WDR45BQ5MNZ6 344 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 PAPD7Q5XG87 772 aaKnown RBP8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 LYSMD4Q5XG99 296 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 ANKS6Q68DC2 871 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 TBC1D3GQ6DHY5 549 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 TBC1D3CQ6IPX1 549 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 AADACL2Q6P093 401 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 ERAP2Q6P179 960 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 DARS2Q6PI48 645 aaKnown RBP8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 NCEH1Q6PIU2 408 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 BRAT1Q6PJG6 821 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 SEM1Q6ZVN7 128 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 SLC13A5Q86YT5 568 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 TBC1D3Q8IZP1 549 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 MINDY1Q8N5J2 469 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 AADATQ8N5Z0 425 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 CADM4Q8NFZ8 388 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 OR2T34Q8NGX1 318 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 CEP76Q8TAP6 659 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 SLC35B2Q8TB61 432 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 HTR3CQ8WXA8 447 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 SNX19Q92543 992 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 LRRC45Q96CN5 670 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 KLHL32Q96NJ5 620 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 QKIQ96PU8 341 aaKnown RBP eCLIP8.01□□□□□ -1.138e-8■■■■□ 26.5
TRAPPC12-221ENST00000489032 NAP1L3Q99457 506 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 VAT1Q99536 393 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 SEMA3CQ99985 751 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 SSBP3Q9BWW4 388 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 CARD6Q9BX69 1037 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 TLR10Q9BXR5 811 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 PREBQ9HCU5 417 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 HOMER3Q9NSC5 361 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 TMEM74BQ9NUR3 256 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 PNPOQ9NVS9 261 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 KLHL8Q9P2G9 620 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 DKK3Q9UBP4 350 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 SARDHQ9UL12 918 aa8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 TNRC6BQ9UPQ9 1833 aaKnown RBP8.01□□□□□ -1.13
TRAPPC12-221ENST00000489032 CFAP46Q8IYW2 2715 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 CTAGE15A4D2H0 777 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 CFAP69A5D8W1 941 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 FAM227AF5H4B4 570 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 B3GALT2O43825 422 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 PIGNO95427 931 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 HLA-DQB2P05538 268 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 CD1AP06126 327 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 CTAGE8P0CG41 777 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 ADRB3P13945 408 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 GNSP15586 552 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 TCP1P17987 556 aaKnown RBP8□□□□□ -1.13
TRAPPC12-221ENST00000489032 ACSL1P33121 698 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 HOXD12P35452 270 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 DRD3P35462 400 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 ACTN2P35609 894 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 NUDT1P36639 197 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms