RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 H0YIG0 161 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 H3BQ06 376 aaPredicted RBP3.3□□□□□ -1.88
PRPF4-203ENST00000488937 PLK4O00444 970 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 CTDSPLO15194 276 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 CASC3O15234 703 aaKnown RBP3.3□□□□□ -1.88
PRPF4-203ENST00000488937 MTX2O75431 263 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 CTAG2O75638 210 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 SBK2P0C263 348 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 IQCF3P0C7M6 154 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 SPP1P10451 314 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 ETFAP13804 333 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 CD9P21926 228 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 PCSK6P29122 969 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 STIP1P31948 543 aaKnown RBP3.3□□□□□ -1.88
PRPF4-203ENST00000488937 IER3P46695 156 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 VPS41P49754 854 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 ZNF75DP51815 510 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 VAV2P52735 878 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 MFAP3P55082 362 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 TNFRSF17Q02223 184 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 NHLH1Q02575 133 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 FOXF2Q12947 444 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 SNTB2Q13425 540 aaKnown RBP3.3□□□□□ -1.88
PRPF4-203ENST00000488937 CNGA3Q16281 694 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 PNLIPRP3Q17RR3 467 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 CCDC152Q4G0S7 254 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 KLHL22Q53GT1 634 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 CFAP157Q5JU67 520 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 GCNT6Q5T4J0 391 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 TMEM268Q5VZI3 342 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 DENND2CQ68D51 928 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 PRR27Q6MZM9 219 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 ARMC6Q6NXE6 501 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 FBXO46Q6PJ61 603 aaPredicted RBP3.3□□□□□ -1.88
PRPF4-203ENST00000488937 PQLC2Q6ZP29 291 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 Q6ZWC4 215 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 TRILQ7L0X0 811 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 LINGO2Q7L985 606 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 GPR180Q86V85 440 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 TMEM173Q86WV6 379 aaPredicted RBP3.3□□□□□ -1.88
PRPF4-203ENST00000488937 AQP12AQ8IXF9 295 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 ZBTB2Q8N680 514 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 TMEM217Q8N7C4 229 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 RNF148Q8N7C7 305 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 NIPA2Q8N8Q9 360 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 MINDY2Q8NBR6 621 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 BEST2Q8NFU1 509 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 OR52B4Q8NGK2 314 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 OR2T3Q8NH03 318 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 RP9Q8TA86 221 aaKnown RBP3.3□□□□□ -1.88
PRPF4-203ENST00000488937 WDR20Q8TBZ3 569 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 FIG4Q92562 907 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 PIGKQ92643 395 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 FBXL8Q96CD0 374 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 MSI2Q96DH6 328 aaKnown RBP3.3□□□□□ -1.88
PRPF4-203ENST00000488937 OTUB1Q96FW1 271 aaPredicted RBP3.3□□□□□ -1.88
PRPF4-203ENST00000488937 P2RY11Q96G91 374 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 BOD1Q96IK1 185 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 SIN3AQ96ST3 1273 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 ZBTB18Q99592 522 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 RAD9AQ99638 391 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 THAP7Q9BT49 309 aaPredicted RBP3.3□□□□□ -1.88
PRPF4-203ENST00000488937 ABHD14AQ9BUJ0 271 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 IFT27Q9BW83 186 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 ATG10Q9H0Y0 220 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 PIGMQ9H3S5 423 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 SLC28A3Q9HAS3 691 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 FANCEQ9HB96 536 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 CPNE5Q9HCH3 593 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 PALMDQ9NP74 551 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 KLHL1Q9NR64 748 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 AMFRQ9UKV5 643 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 MTUS1Q9ULD2 1270 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 SNX6Q9UNH7 406 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 EXOC6BQ9Y2D4 811 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 MRPS7Q9Y2R9 242 aaKnown RBP3.3□□□□□ -1.88
PRPF4-203ENST00000488937 MFHAS1Q9Y4C4 1052 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 TMEM184BQ9Y519 407 aaPredicted RBP3.3□□□□□ -1.88
PRPF4-203ENST00000488937 SPACA6W5XKT8 324 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 A0A0U1RQJ8 604 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 KANSL1LA0AUZ9 987 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 WDR27A2RRH5 827 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 FAM149AA5PLN7 773 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 MFSD2BA6NFX1 497 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 HEPACAM2A8MVW5 462 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 E9PBE3 544 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 CES2O00748 559 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 MEIS2O14770 477 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 HS3ST1O14792 307 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 TEX28O15482 410 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 AP5Z1O43299 807 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 PPIP5K2O43314 1243 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 KCNAB3O43448 404 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 LPXNO60711 386 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 TBX19O60806 448 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 ZNF217O75362 1048 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 CRCPO75575 148 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 SURF6O75683 361 aaKnown RBP3.29□□□□□ -1.88
PRPF4-203ENST00000488937 RHBDL1O75783 438 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 LIPFP07098 398 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms