RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 OR8K5Q8NH50 307 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 CT55Q8WUE5 264 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 ASZ1Q8WWH4 475 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 FCRL4Q96PJ5 515 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 CARD6Q9BX69 1037 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 NEU2Q9Y3R4 380 aa17.19■□□□□ 0.34
ITGB1-215ENST00000488494 TMEM150CB9EJG8 249 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 TERTO14746 1132 aaKnown RBP17.18■□□□□ 0.34
ITGB1-215ENST00000488494 CPNE3O75131 537 aaKnown RBP17.18■□□□□ 0.34
ITGB1-215ENST00000488494 GPC4O75487 556 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 CHRM5P08912 532 aaPredicted RBP17.18■□□□□ 0.34
ITGB1-215ENST00000488494 CCNYL3P0C7X3 344 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 RPS3P23396 243 aaKnown RBP eCLIP17.18■□□□□ 0.34
ITGB1-215ENST00000488494 AOAHP28039 575 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 ABRQ12979 859 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 TYSND1Q2T9J0 566 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 RNF187Q5TA31 235 aaPredicted RBP17.18■□□□□ 0.34
ITGB1-215ENST00000488494 HOOK3Q86VS8 718 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 LRRC6Q86X45 466 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 SERPINB12Q96P63 405 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 TRAPPC9Q96Q05 1148 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 PANX3Q96QZ0 392 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 XAB2Q9HCS7 855 aaKnown RBP17.18■□□□□ 0.34
ITGB1-215ENST00000488494 LHX9Q9NQ69 397 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 KCND1Q9NSA2 647 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 SPHK1Q9NYA1 384 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 IL1RAPL1Q9NZN1 696 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 CIDEBQ9UHD4 219 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 PADI1Q9ULC6 663 aa17.18■□□□□ 0.34
ITGB1-215ENST00000488494 CES2O00748 559 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 MAP3K7O43318 606 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 KDM1AO60341 852 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 KATNA1O75449 491 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 TCN2P20062 427 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 PKLRP30613 574 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 POLE2P56282 527 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 MC1RQ01726 317 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 DNASE1L3Q13609 305 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 CTSL3PQ5NE16 218 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 C16orf46Q6P387 395 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 DCUN1D3Q8IWE4 304 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 C19orf47Q8N9M1 422 aaKnown RBP17.17■□□□□ 0.34
ITGB1-215ENST00000488494 CFAP61Q8NHU2 1237 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 GSDMBQ8TAX9 411 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 GRK7Q8WTQ7 553 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 LPGAT1Q92604 370 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 ANP32BQ92688 251 aaKnown RBP17.17■□□□□ 0.34
ITGB1-215ENST00000488494 ZNF669Q96BR6 464 aaPredicted RBP17.17■□□□□ 0.34
ITGB1-215ENST00000488494 CATSPER2Q96P56 530 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 LATS2Q9NRM7 1088 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 OR6C2Q9NZP2 312 aa17.17■□□□□ 0.34
ITGB1-215ENST00000488494 TLN1Q9Y490 2541 aaKnown RBP17.16■□□□□ 0.34
ITGB1-215ENST00000488494 HELZ2Q9BYK8 2649 aaKnown RBP17.16■□□□□ 0.34
ITGB1-215ENST00000488494 SLCO2B1O94956 709 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 RPN2P04844 631 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 MLNP12872 115 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 PAMP19021 973 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 OGNP20774 298 aaKnown RBP17.16■□□□□ 0.34
ITGB1-215ENST00000488494 NFATC3Q12968 1075 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 GPS2Q13227 327 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 PPP1R7Q15435 360 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 PRAMEF17Q5VTA0 474 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 ARMC3Q5W041 872 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 ZNF470Q6ECI4 717 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 UNC5DQ6UXZ4 953 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 CDHR3Q6ZTQ4 885 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 OTOAQ7RTW8 1153 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 SDCCAG8Q86SQ7 713 aaPredicted RBP17.16■□□□□ 0.34
ITGB1-215ENST00000488494 MCUQ8NE86 351 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 OR1L3Q8NH93 324 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 FLVCR1-AS1Q8TAF5 88 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 SKA2Q8WVK7 121 aaPredicted RBP17.16■□□□□ 0.34
ITGB1-215ENST00000488494 FAM136AQ96C01 138 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 OR2A14Q96R47 310 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 RUFY1Q96T51 708 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 TSR3Q9UJK0 312 aaKnown RBP17.16■□□□□ 0.34
ITGB1-215ENST00000488494 KCND3Q9UK17 655 aa17.16■□□□□ 0.34
ITGB1-215ENST00000488494 RUVBL2Q9Y230 463 aaKnown RBP17.16■□□□□ 0.34
ITGB1-215ENST00000488494 TENM4Q6N022 2769 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 A0A0J9YY10 115 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 FAM237BA0A1B0GVD1 139 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 SDR42E2A6NKP2 422 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 C21orf140B9A014 251 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 PFDN6O15212 129 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 NIPSNAP2O75323 286 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 MSL3P1P0C860 447 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 CYP2A7P20853 494 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 PEBP1P30086 187 aaKnown RBP17.15■□□□□ 0.34
ITGB1-215ENST00000488494 FMO4P31512 558 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 MAGEA3P43357 314 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 CCR10P46092 362 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 RAB28P51157 221 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 DHX34Q14147 1143 aaKnown RBP17.15■□□□□ 0.34
ITGB1-215ENST00000488494 DEFB110Q30KQ9 67 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 DEFB109BQ30KR1 87 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 ZNF789Q5FWF6 425 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 FAM199XQ6PEV8 388 aaPredicted RBP17.15■□□□□ 0.34
ITGB1-215ENST00000488494 TAX1BP1Q86VP1 789 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 AGGF1Q8N302 714 aaeCLIP17.15■□□□□ 0.34
ITGB1-215ENST00000488494 PDLIM2Q96JY6 352 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms