RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 GPR22Q99680 433 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 STRADBQ9C0K7 418 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 POPDC3Q9HBV1 291 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 HRASLS2Q9NWW9 162 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 AKAP7Q9P0M2 348 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-219ENST00000488186 LNPEPQ9UIQ6 1025 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 RUVBL2Q9Y230 463 aaKnown RBP15.3■□□□□ 0.04
C9orf3-219ENST00000488186 MSRB2Q9Y3D2 182 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 NFS1Q9Y697 457 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 CHD8Q9HCK8 2581 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 D6RAR5 112 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 CSO75390 466 aaKnown RBP15.29■□□□□ 0.04
C9orf3-219ENST00000488186 KRT38O76015 456 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 MATN4O95460 622 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 C1orf105O95561 183 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 SYF2O95926 243 aaKnown RBP15.29■□□□□ 0.04
C9orf3-219ENST00000488186 CYP2A7P20853 494 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 SHMT2P34897 504 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 INHBCP55103 352 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 TIAL1Q01085 375 aaKnown RBP eCLIP15.29■□□□□ 0.04
C9orf3-219ENST00000488186 TARDBPQ13148 414 aaKnown RBP eCLIP15.29■□□□□ 0.04
C9orf3-219ENST00000488186 SQSTM1Q13501 440 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 SNAP47Q5SQN1 464 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 CDCP2Q5VXM1 449 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 TMEM71Q6P5X7 295 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 WDR74Q6RFH5 385 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-219ENST00000488186 PIWIL4Q7Z3Z4 852 aaKnown RBP15.29■□□□□ 0.04
C9orf3-219ENST00000488186 SLC44A1Q8WWI5 657 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 TGM7Q96PF1 710 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 NUDT22Q9BRQ3 303 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 MCMBPQ9BTE3 642 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 TRIM54Q9BYV2 358 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 TXLNGYQ9BZA5 131 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 XKR8Q9H6D3 395 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 CAB39LQ9H9S4 337 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 RRAGDQ9NQL2 400 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-219ENST00000488186 KLHL3Q9UH77 587 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 TLK1Q9UKI8 766 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 PLAGL1Q9UM63 463 aa15.29■□□□□ 0.04
C9orf3-219ENST00000488186 GSAPA4D1B5 854 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 FAM149AA5PLN7 773 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 CASC3O15234 703 aaKnown RBP15.28■□□□□ 0.04
C9orf3-219ENST00000488186 CAPN5O15484 640 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-219ENST00000488186 RASSF9O75901 435 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 C8GP07360 202 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 HIST1H2AGP0C0S8 130 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-219ENST00000488186 POLR2CP19387 275 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-219ENST00000488186 HIST1H2ADP20671 130 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 MPSTP25325 297 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 CNTFP26441 200 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 CRABP2P29373 138 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 BDKRB1P46663 353 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 CAPZBP47756 277 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 PGGT1BP53609 377 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 RAB10P61026 200 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 BMPR2Q13873 1038 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 ZNF460Q14592 562 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 CYHR1Q6ZMK1 362 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 CEP97Q8IW35 865 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 OR4D9Q8NGE8 314 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 MCOLN3Q8TDD5 553 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 ASB11Q8WXH4 323 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 RSC1A1Q92681 617 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 HIST1H2AHQ96KK5 128 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 HIST1H2AJQ99878 128 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 H2AFJQ9BTM1 129 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 SCNM1Q9BWG6 230 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 RAB11FIP5Q9BXF6 653 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 CIDEBQ9UHD4 219 aa15.28■□□□□ 0.04
C9orf3-219ENST00000488186 OR5K3A6NET4 321 aa15.27■□□□□ 0.04
C9orf3-219ENST00000488186 A8MU76 341 aa15.27■□□□□ 0.04
C9orf3-219ENST00000488186 MATN2O00339 956 aa15.27■□□□□ 0.04
C9orf3-219ENST00000488186 SLC16A5O15375 505 aa15.27■□□□□ 0.04
C9orf3-219ENST00000488186 PHGDHO43175 533 aaKnown RBP15.27■□□□□ 0.04
C9orf3-219ENST00000488186 PSIP1O75475 530 aaKnown RBP15.27■□□□□ 0.04
C9orf3-219ENST00000488186 KRT37O76014 449 aa15.27■□□□□ 0.04
C9orf3-219ENST00000488186 HOXB3P14651 431 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-219ENST00000488186 TYK2P29597 1187 aa15.27■□□□□ 0.04
C9orf3-219ENST00000488186 RAB28P51157 221 aa15.27■□□□□ 0.04
C9orf3-219ENST00000488186 NAA30Q147X3 362 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-219ENST00000488186 ISXQ2M1V0 245 aa15.27■□□□□ 0.04
C9orf3-219ENST00000488186 TAF1BQ53T94 588 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-219ENST00000488186 TBC1D1Q86TI0 1168 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-219ENST00000488186 DCBLD1Q8N8Z6 715 aa15.27■□□□□ 0.04
C9orf3-219ENST00000488186 OR9A1PQ8NGU1 263 aa15.27■□□□□ 0.04
C9orf3-219ENST00000488186 SEMA6CQ9H3T2 930 aa15.27■□□□□ 0.04
C9orf3-219ENST00000488186 OR6C2Q9NZP2 312 aa15.27■□□□□ 0.04
C9orf3-219ENST00000488186 ZNF180Q9UJW8 692 aa15.27■□□□□ 0.04
C9orf3-219ENST00000488186 RAB21Q9UL25 225 aa15.27■□□□□ 0.04
C9orf3-219ENST00000488186 PIPSLA2A3N6 862 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 ZNF839A8K0R7 811 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 ARHGEF33A8MVX0 844 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 C2orf74A8MZ97 194 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 ISM1B1AKI9 464 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 GFYI3L273 518 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 RASGRF2O14827 1237 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 MAP3K7O43318 606 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 ERLIN1O75477 346 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 CCDC166P0CW27 439 aa15.26■□□□□ 0.03
C9orf3-219ENST00000488186 ZNF37AP17032 561 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms