RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 AMIGO1Q86WK6 493 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 RAB43Q86YS6 212 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 KLHDC8BQ8IXV7 354 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 CCDC170Q8IYT3 715 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 TC2NQ8N9U0 490 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 GLIS1Q8NBF1 620 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 FDCSPQ8NFU4 85 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 CCDC110Q8TBZ0 833 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 DNAJC1Q96KC8 554 aaKnown RBP8.27□□□□□ -1.09
PRKCB-208ENST00000487674 CALR3Q96L12 384 aaKnown RBP8.27□□□□□ -1.09
PRKCB-208ENST00000487674 TRAPPC9Q96Q05 1148 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 C17orf62Q9BQA9 187 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 HGH1Q9BTY7 390 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 NUDT9Q9BW91 350 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 SLC29A3Q9BZD2 475 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 OSBPL8Q9BZF1 889 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 SLC7A5P2Q9GIP4 190 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 TSPY26PQ9H489 355 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 FAM96AQ9H5X1 160 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 GPR83Q9NYM4 423 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 ACTR10Q9NZ32 417 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 SERTAD3Q9UJW9 196 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 TFR2Q9UP52 801 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 PCDHA3Q9Y5H8 950 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 PCSK5Q92824 1860 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 NOTCH2Q04721 2471 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 PCM1Q15154 2024 aa8.27□□□□□ -1.09
PRKCB-208ENST00000487674 DOPEY1Q5JWR5 2465 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 ZNF749O43361 778 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 AP2A2O94973 939 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 TJP3O95049 919 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 PVRP15151 417 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 AGXTP21549 392 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 PDHA2P29803 388 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 SHMT2P34897 504 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 CYLC1P35663 651 aaPredicted RBP8.26□□□□□ -1.09
PRKCB-208ENST00000487674 CETN2P41208 172 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 RWDD2BP57060 319 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 CACNG1Q06432 222 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 ATP1A4Q13733 1029 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 SPARCL1Q14515 664 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 INPP5JQ15735 1006 aaPredicted RBP8.26□□□□□ -1.09
PRKCB-208ENST00000487674 C4orf17Q53FE4 359 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 PRR30Q53SZ7 412 aaPredicted RBP8.26□□□□□ -1.09
PRKCB-208ENST00000487674 ZRANB3Q5FWF4 1079 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 VWA5B1Q5TIE3 1220 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 ZNF385CQ66K41 422 aaPredicted RBP8.26□□□□□ -1.09
PRKCB-208ENST00000487674 SLC6A19Q695T7 634 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 ARHGEF18Q6ZSZ5 1173 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 MRGPREQ86SM8 312 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 HOOK3Q86VS8 718 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 SERPINA9Q86WD7 417 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 GPR135Q8IZ08 494 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 ADGRF3Q8IZF5 1079 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 ZBTB2Q8N680 514 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 C19orf47Q8N9M1 422 aaKnown RBP8.26□□□□□ -1.09
PRKCB-208ENST00000487674 Q8NA96 180 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 RNF214Q8ND24 703 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 SSC4DQ8WTU2 575 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 TFGQ92734 400 aaPredicted RBP8.26□□□□□ -1.09
PRKCB-208ENST00000487674 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.26□□□□□ -1.09
PRKCB-208ENST00000487674 PNPLA2Q96AD5 504 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 IP6K3Q96PC2 410 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 SMAD5Q99717 465 aaKnown RBP8.26□□□□□ -1.09
PRKCB-208ENST00000487674 FAM118BQ9BPY3 351 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 CHRNA10Q9GZZ6 450 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 KLHL25Q9H0H3 589 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 LRRC40Q9H9A6 602 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 SLAMF7Q9NQ25 335 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 NLE1Q9NVX2 485 aaPredicted RBP8.26□□□□□ -1.09
PRKCB-208ENST00000487674 CUEDC1Q9NWM3 386 aaPredicted RBP8.26□□□□□ -1.09
PRKCB-208ENST00000487674 PLEKHB1Q9UF11 243 aaPredicted RBP8.26□□□□□ -1.09
PRKCB-208ENST00000487674 ICKQ9UPZ9 632 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 AP1M2Q9Y6Q5 423 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 TEX15Q9BXT5 2789 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 NUP210LQ5VU65 1888 aa8.26□□□□□ -1.09
PRKCB-208ENST00000487674 UTP20O75691 2785 aaKnown RBP8.25□□□□□ -1.09
PRKCB-208ENST00000487674 FAM181BA6NEQ2 426 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 A6NL46 340 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 QSOX1O00391 747 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 LIN7AO14910 233 aaPredicted RBP8.25□□□□□ -1.09
PRKCB-208ENST00000487674 ZNF185O15231 689 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 KLF7O75840 302 aaPredicted RBP8.25□□□□□ -1.09
PRKCB-208ENST00000487674 OR2B3O76000 313 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 FTH1P02794 183 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 ALPPP05187 535 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 UGT2B7P16662 529 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 OTX2P32243 289 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 NSG1P42857 185 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 CDKN1CP49918 316 aaPredicted RBP8.25□□□□□ -1.09
PRKCB-208ENST00000487674 PRKG2Q13237 762 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 ITIH4Q14624 930 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 DBN1Q16643 649 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 P3H1Q32P28 736 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 KCTD11Q693B1 232 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 RHBDD2Q6NTF9 364 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 PACS1Q6VY07 963 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 TAS2R42Q7RTR8 314 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 TRIM73Q86UV7 250 aa8.25□□□□□ -1.09
PRKCB-208ENST00000487674 TMTC1Q8IUR5 882 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms