RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 TCRBV21S2A2A0A5A6 115 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 PRR5-ARHGAP8B1AHC4 643 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 CACNB4O00305 520 aaPredicted RBP6.88□□□□□ -1.31
SF3A3-206ENST00000487062 PPP6CO00743 305 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 PIP5K1BO14986 540 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 CHUKO15111 745 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 UBDO15205 165 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 GYG2O15488 501 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 KCNJ13O60928 360 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 LILRB5O75023 590 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 WDR47O94967 919 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 OR4F21O95013 312 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 RPN2P04844 631 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 EBLN1P0CF75 366 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 THRAP10827 490 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 MYCLP1P12525 358 aaPredicted RBP6.88□□□□□ -1.31
SF3A3-206ENST00000487062 HGFP14210 728 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 LBPP18428 481 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 TRIM23P36406 574 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 MAGEA9P43362 315 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 PREPP48147 710 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 STX1BP61266 288 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 KLF10Q13118 480 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 UBAP2LQ14157 1087 aaKnown RBP6.88□□□□□ -1.31
SF3A3-206ENST00000487062 SQLEQ14534 574 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 INPP5AQ14642 412 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 MAPRE2Q15555 327 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 UGT3A2Q3SY77 523 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 DNAL1Q4LDG9 190 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 FBXO48Q5FWF7 155 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 HABP4Q5JVS0 413 aaKnown RBP6.88□□□□□ -1.31
SF3A3-206ENST00000487062 DOK6Q6PKX4 331 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 CRTC3Q6UUV7 619 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 UNC5DQ6UXZ4 953 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 ASRGL1Q7L266 308 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 AMZ2Q86W34 360 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 TREML1Q86YW5 311 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 RASGRP3Q8IV61 690 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 PGBD3Q8N328 593 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 FBXO15Q8NCQ5 510 aaPredicted RBP6.88□□□□□ -1.31
SF3A3-206ENST00000487062 DENND6BQ8NEG7 585 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 OR2T34Q8NGX1 318 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 CFAP61Q8NHU2 1237 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 METTL6Q8TCB7 284 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 KLK6Q92876 244 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 FOXJ1Q92949 421 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 SLC7A6OSQ96CW6 309 aaPredicted RBP6.88□□□□□ -1.31
SF3A3-206ENST00000487062 PRR11Q96HE9 360 aaPredicted RBP6.88□□□□□ -1.31
SF3A3-206ENST00000487062 SHDQ96IW2 340 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 CATSPER2Q96P56 530 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 TMEM79Q9BSE2 394 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 BTBD10Q9BSF8 475 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 NTMT1Q9BV86 223 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 SLC29A3Q9BZD2 475 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 OSBPL6Q9BZF3 934 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 BTBD1Q9H0C5 482 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 SLC6A17Q9H1V8 727 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 SGK2Q9HBY8 427 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 CD248Q9HCU0 757 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 TNFRSF12AQ9NP84 129 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 ARHGEF3Q9NR81 526 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 DNAJC11Q9NVH1 559 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 TRPS1Q9UHF7 1281 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 DUSP12Q9UNI6 340 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 TMEM98Q9Y2Y6 226 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 DNAJC15Q9Y5T4 150 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 BRWD1Q9NSI6 2320 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 NUMA1Q14980 2115 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 DOCK9Q9BZ29 2069 aa6.88□□□□□ -1.31
SF3A3-206ENST00000487062 TMEM202A6NGA9 273 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 ARHGEF33A8MVX0 844 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 B2RBV5 119 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 CHURC1-FNTBB4DL54 471 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 LOC730098B7Z3J9 87 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 IFRD1O00458 451 aaPredicted RBP6.87□□□□□ -1.31
SF3A3-206ENST00000487062 OR7A17O14581 309 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 FPGTO14772 594 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 CLGNO14967 610 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 CLDN9O95484 217 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 KRT6AP02538 564 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 KRT6BP04259 564 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 JUNP05412 331 aaKnown RBP6.87□□□□□ -1.31
SF3A3-206ENST00000487062 CAPN1P07384 714 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 HOXC4P09017 264 aaPredicted RBP6.87□□□□□ -1.31
SF3A3-206ENST00000487062 COX4I1P13073 169 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 GABRG2P18507 467 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 KELP23276 732 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 PIK3R1P27986 724 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 MAT2AP31153 395 aaKnown RBP6.87□□□□□ -1.31
SF3A3-206ENST00000487062 IGFALSP35858 605 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 SLC6A12P48065 614 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 KRT6CP48668 564 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 ATP4BP51164 291 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 MMP16P51512 607 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 TPMTP51580 245 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 DGKEP52429 567 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 TRAF3Q13114 568 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 FGL2Q14314 439 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 NAA25Q14CX7 972 aa6.87□□□□□ -1.31
SF3A3-206ENST00000487062 HERC3Q15034 1050 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms