RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 A0A088AWK7 358 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 TMEM202A6NGA9 273 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 LOC730098B7Z3J9 87 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 MAN2B1O00754 1011 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 KMOO15229 486 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 ULK1O75385 1050 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 RNASEH2AO75792 299 aaKnown RBP11.34□□□□□ -0.59
PRKCB-207ENST00000486868 C1orf105O95561 183 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 RPN2P04844 631 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 ALDOCP09972 364 aaKnown RBP11.34□□□□□ -0.59
PRKCB-207ENST00000486868 LINC00032P0C843 101 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 EPORP19235 508 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 IGFBP4P22692 258 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 ACADLP28330 430 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 CUL3Q13618 768 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 C18orf21Q32NC0 220 aaPredicted RBP11.34□□□□□ -0.59
PRKCB-207ENST00000486868 PTCHD3Q3KNS1 767 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 ATP6AP1LQ52LC2 224 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 C6orf136Q5SQH8 315 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 ZNF648Q5T619 568 aaPredicted RBP11.34□□□□□ -0.59
PRKCB-207ENST00000486868 KIAA1211LQ6NV74 962 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 XKR5Q6UX68 686 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 LRRTM4Q86VH4 590 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 AMZ2Q86W34 360 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 HEATR4Q86WZ0 1026 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 FAM9CQ8IZT9 166 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 DSELQ8IZU8 1212 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 ENDOVQ8N8Q3 282 aaKnown RBP11.34□□□□□ -0.59
PRKCB-207ENST00000486868 HMGCLL1Q8TB92 370 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 ROPN1LQ96C74 230 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 SIPA1Q96FS4 1042 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 THTPAQ9BU02 230 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 DENND2DQ9H6A0 471 aaPredicted RBP11.34□□□□□ -0.59
PRKCB-207ENST00000486868 WDR26Q9H7D7 661 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 ACSL5Q9ULC5 683 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 SNX6Q9UNH7 406 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 ZFR2Q9UPR6 939 aaKnown RBP11.34□□□□□ -0.59
PRKCB-207ENST00000486868 CCL27Q9Y4X3 112 aa11.34□□□□□ -0.59
PRKCB-207ENST00000486868 KCNE1BA0A087WTH5 132 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 ANTXRLA6NF34 631 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 C10orf142B7Z368 130 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 MANBAO00462 879 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 TOR1BO14657 336 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 NRP2O60462 931 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 NPPAP01160 153 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 SRFP11831 508 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 MYCLP1P12525 358 aaPredicted RBP11.33□□□□□ -0.6
PRKCB-207ENST00000486868 HSD3B1P14060 373 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 JUPP14923 745 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 HSD3B2P26439 372 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 HNF4AP41235 474 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 GDF5P43026 501 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 ADPRHP54922 357 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 MTTPP55157 894 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 SEC13P55735 322 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 PFN3P60673 137 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 ACTR3P61158 418 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 SLC25A3Q00325 362 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 ABRQ12979 859 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 ART3Q13508 389 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 CCINQ13939 588 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 GRB7Q14451 532 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 ARHGAP19Q14CB8 494 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 RPS6KA2Q15349 733 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 SMAD2Q15796 467 aaKnown RBP11.33□□□□□ -0.6
PRKCB-207ENST00000486868 ZXDCQ2QGD7 858 aaPredicted RBP11.33□□□□□ -0.6
PRKCB-207ENST00000486868 AGKQ53H12 422 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 FBXO48Q5FWF7 155 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.33□□□□□ -0.6
PRKCB-207ENST00000486868 METRNLQ641Q3 311 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 AGTRAPQ6RW13 159 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 IL27RAQ6UWB1 636 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 PRR23BQ6ZRT6 265 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 LPCAT2Q7L5N7 544 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 TRIM69Q86WT6 500 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 FUNDC1Q8IVP5 155 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 CFAP206Q8IYR0 622 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 DEFB107AQ8IZN7 70 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 SYNPOQ8N3V7 929 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 FBXW8Q8N3Y1 598 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 PCYOX1LQ8NBM8 494 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 PLA2G15Q8NCC3 412 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 OR9A1PQ8NGU1 263 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 FBXO27Q8NI29 283 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 SETD7Q8WTS6 366 aaKnown RBP11.33□□□□□ -0.6
PRKCB-207ENST00000486868 JADE3Q92613 823 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 SCARF2Q96GP6 870 aaPredicted RBP11.33□□□□□ -0.6
PRKCB-207ENST00000486868 TIMM29Q9BSF4 260 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 SLC17A9Q9BYT1 436 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 OR52A5Q9H2C5 316 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 EHD1Q9H4M9 534 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 DCLRE1BQ9H816 532 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 ACTR8Q9H981 624 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 STOX2Q9P2F5 926 aaPredicted RBP11.33□□□□□ -0.6
PRKCB-207ENST00000486868 SERGEFQ9UGK8 458 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 LIMD1Q9UGP4 676 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 BCAP29Q9UHQ4 241 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 BAIAP2L1Q9UHR4 511 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 MMP17Q9ULZ9 603 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 BTRCQ9Y297 605 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms