RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 BORAQ6PGQ7 559 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 PCSK4Q6UW60 755 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 UNC5DQ6UXZ4 953 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 RAB42Q8N4Z0 105 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 MCUQ8NE86 351 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 MED8Q96G25 268 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 CAPZA3Q96KX2 299 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 PPM1MQ96MI6 270 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 CATSPER2Q96P56 530 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 SERPINB12Q96P63 405 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 FCRL4Q96PJ5 515 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 SLC12A9Q9BXP2 914 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 SPRY4Q9C004 299 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 SLC7A5P2Q9GIP4 190 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 KLHL25Q9H0H3 589 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 OR6C2Q9NZP2 312 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 KCND3Q9UK17 655 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 PCDHB3Q9Y5E6 796 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 PIEZO2Q9H5I5 2752 aa12.49□□□□□ -0.41
CHMP3-208ENST00000486404 KALRNO60229 2985 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 CTAGE9A4FU28 777 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 SDR42E2A6NKP2 422 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 USP27XA6NNY8 438 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 ISM1B1AKI9 464 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 E5RI56 91 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 H3BMM5 538 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 KATNA1O75449 491 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 TIAF1O95411 115 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 CHRM5P08912 532 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-208ENST00000486404 FAM87AP0C7U9 286 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 PVRP15151 417 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 ST6GAL1P15907 406 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 UGT2B7P16662 529 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 TCN2P20062 427 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 CYP2A7P20853 494 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 AOAHP28039 575 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 FMO4P31512 558 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 RAB28P51157 221 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 THOC5Q13769 683 aaKnown RBP12.48□□□□□ -0.41
CHMP3-208ENST00000486404 TBR1Q16650 682 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 TYSND1Q2T9J0 566 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 C16orf46Q6P387 395 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 UNC5AQ6ZN44 842 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 TRIM73Q86UV7 250 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 CAND1Q86VP6 1230 aaKnown RBP12.48□□□□□ -0.41
CHMP3-208ENST00000486404 PPIL6Q8IXY8 311 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 ADGRF3Q8IZF5 1079 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 C19orf47Q8N9M1 422 aaKnown RBP12.48□□□□□ -0.41
CHMP3-208ENST00000486404 FOPNLQ96NB1 174 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 TCF12Q99081 682 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 NRTNQ99748 197 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 RAB11FIP5Q9BXF6 653 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 PITPNM3Q9BZ71 974 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 DDX47Q9H0S4 455 aaKnown RBP12.48□□□□□ -0.41
CHMP3-208ENST00000486404 P2RY12Q9H244 342 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 CCDC68Q9H2F9 335 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 SYTL2Q9HCH5 934 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 KCND1Q9NSA2 647 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 IRAK4Q9NWZ3 460 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 IL17BQ9UHF5 180 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 TSR3Q9UJK0 312 aaKnown RBP12.48□□□□□ -0.41
CHMP3-208ENST00000486404 PADI1Q9ULC6 663 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 MRFAP1Q9Y605 127 aa12.48□□□□□ -0.41
CHMP3-208ENST00000486404 A0A0J9YY10 115 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 FAM237BA0A1B0GVD1 139 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 MAGEB16A2A368 324 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 C1QL1O75973 258 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 ESR1P03372 595 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 NTRK1P04629 796 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 ARNTP27540 789 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 PKLRP30613 574 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 CCR10P46092 362 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 ABRQ12979 859 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 DNASE1L3Q13609 305 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 CTSL3PQ5NE16 218 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 PLEKHS1Q5SXH7 462 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 NEPROQ6NW34 567 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 CNSTQ6PJW8 725 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 TAX1BP1Q86VP1 789 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 VRK3Q8IV63 474 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 ZNF843Q8N446 348 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 CT55Q8WUE5 264 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 LPGAT1Q92604 370 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 MR1Q95460 341 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 FAM136AQ96C01 138 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 ZNF501Q96CX3 271 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-208ENST00000486404 CLIP3Q96DZ5 547 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 PDLIM2Q96JY6 352 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 TRAPPC9Q96Q05 1148 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 NAPGQ99747 312 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-208ENST00000486404 LHX9Q9NQ69 397 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 LATS2Q9NRM7 1088 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 INTS10Q9NVR2 710 aaKnown RBP12.47□□□□□ -0.41
CHMP3-208ENST00000486404 CIDEBQ9UHD4 219 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 SLC39A10Q9ULF5 831 aa12.47□□□□□ -0.41
CHMP3-208ENST00000486404 MRPS18BQ9Y676 258 aaKnown RBP12.47□□□□□ -0.41
CHMP3-208ENST00000486404 SMG1Q96Q15 3661 aaKnown RBP12.47□□□□□ -0.41
CHMP3-208ENST00000486404 SPTBP11277 2137 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 C21orf140B9A014 251 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 E7EQ34 232 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms