RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 CSTF2P33240 577 aaKnown RBP eCLIP11.5□□□□□ -0.57
HPS4-214ENST00000485842 GP5P40197 560 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 RGS4P49798 205 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 SEPHS1P49903 392 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 PRKAA1Q13131 559 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 TRA2AQ13595 282 aaKnown RBP eCLIP11.5□□□□□ -0.57
HPS4-214ENST00000485842 UAP1Q16222 522 aaPredicted RBP11.5□□□□□ -0.57
HPS4-214ENST00000485842 FAM153CQ494X1 144 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 CCSMST1Q4G0I0 132 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 PAQR3Q6TCH7 311 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 CYS1Q717R9 158 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 TAX1BP1Q86VP1 789 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 AMIGO1Q86WK6 493 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 FBXO39Q8N4B4 442 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 WDR36Q8NI36 951 aaKnown RBP11.5□□□□□ -0.57
HPS4-214ENST00000485842 UHMK1Q8TAS1 419 aaKnown RBP11.5□□□□□ -0.57
HPS4-214ENST00000485842 GATA6Q92908 595 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 LINGO1Q96FE5 620 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 ZDHHC12Q96GR4 267 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 IL17FQ96PD4 163 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 RBBP8Q99708 897 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 TFB2MQ9H5Q4 396 aaKnown RBP11.5□□□□□ -0.57
HPS4-214ENST00000485842 POLR1BQ9H9Y6 1135 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 AKAP7Q9P0M2 348 aaPredicted RBP11.5□□□□□ -0.57
HPS4-214ENST00000485842 KLHL42Q9P2K6 505 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 PISDQ9UG56 409 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 SLC39A10Q9ULF5 831 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 MTO1Q9Y2Z2 717 aaKnown RBP11.5□□□□□ -0.57
HPS4-214ENST00000485842 VWA7Q9Y334 891 aa11.5□□□□□ -0.57
HPS4-214ENST00000485842 CEP295Q9C0D2 2601 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 A0A1W2PNU3 283 aaPredicted RBP11.49□□□□□ -0.57
HPS4-214ENST00000485842 ARHGEF33A8MVX0 844 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 C1QTNF9BB2RNN3 333 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 BTN3A3O00478 584 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 PLD2O14939 933 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 HGSO14964 777 aaPredicted RBP11.49□□□□□ -0.57
HPS4-214ENST00000485842 MATN4O95460 622 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 CATP04040 527 aaKnown RBP11.49□□□□□ -0.57
HPS4-214ENST00000485842 C1QTNF9P0C862 333 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 JMJD7P0C870 316 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 MPC1LP0DKB6 136 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 CBSLP0DN79 551 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 MYBL2P10244 700 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 PKLRP30613 574 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 SHMT2P34897 504 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 CBSP35520 551 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 CCNFP41002 786 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 SKIV2L2P42285 1042 aaKnown RBP11.49□□□□□ -0.57
HPS4-214ENST00000485842 MAPK10P53779 464 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 SLC12A2P55011 1212 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 TAS2R39P59534 338 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 EIF3IQ13347 325 aaKnown RBP11.49□□□□□ -0.57
HPS4-214ENST00000485842 NAB1Q13506 487 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 ZNF460Q14592 562 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 SLMAPQ14BN4 828 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 CACHD1Q5VU97 1274 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 UNQ6494/PRO21346Q6UXR6 183 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 NEK10Q6ZWH5 1172 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 FAM129CQ86XR2 697 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 RELL1Q8IUW5 271 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 MYO1HQ8N1T3 1032 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 LMNTD1Q8N9Z9 388 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 AGBL5Q8NDL9 886 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 MDM1Q8TC05 714 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 EEF1AKMT1Q8WVE0 214 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 CYTH2Q99418 400 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 MAP3K3Q99759 626 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 CMKLR1Q99788 373 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 NRSN2Q9GZP1 204 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 ACSS3Q9H6R3 686 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 EPHA6Q9UF33 1036 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.49□□□□□ -0.57
HPS4-214ENST00000485842 V9GYY5 206 aaPredicted RBP11.49□□□□□ -0.57
HPS4-214ENST00000485842 AKAP13Q12802 2813 aa11.49□□□□□ -0.57
HPS4-214ENST00000485842 SPEGQ15772 3267 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 PIPSLA2A3N6 862 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 TLCD2A6NGC4 264 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 EFCAB7A8K855 629 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 C2orf74A8MZ97 194 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 EIF3FO00303 357 aaPredicted RBP11.48□□□□□ -0.57
HPS4-214ENST00000485842 BRINP1O60477 761 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 PSIP1O75475 530 aaKnown RBP11.48□□□□□ -0.57
HPS4-214ENST00000485842 SYF2O95926 243 aaKnown RBP11.48□□□□□ -0.57
HPS4-214ENST00000485842 CHRM5P08912 532 aaPredicted RBP11.48□□□□□ -0.57
HPS4-214ENST00000485842 CCL4P13236 92 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 ITIH1P19827 911 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 CD9P21926 228 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 CDH3P22223 829 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 SPRP35270 261 aaPredicted RBP11.48□□□□□ -0.57
HPS4-214ENST00000485842 ETV5P41161 510 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 RAB28P51157 221 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 KPNA2P52292 529 aaKnown RBP11.48□□□□□ -0.57
HPS4-214ENST00000485842 IL2P60568 153 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 CYP4F3Q08477 520 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 GRB7Q14451 532 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 RTP5Q14D33 572 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.48□□□□□ -0.57
HPS4-214ENST00000485842 GRTP1Q5TC63 336 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 LRRC8EQ6NSJ5 796 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 FBXO38Q6PIJ6 1188 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms