RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 DHRS13Q6UX07 377 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 CROCCP2Q86T23 111 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 TBC1D1Q86TI0 1168 aaPredicted RBP8.05□□□□□ -1.12
SF3A1-208ENST00000485618 AMIGO1Q86WK6 493 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 SIDT2Q8NBJ9 832 aaKnown RBP8.05□□□□□ -1.12
SF3A1-208ENST00000485618 OR4D9Q8NGE8 314 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 HNRNPLLQ8WVV9 542 aaKnown RBP8.05□□□□□ -1.12
SF3A1-208ENST00000485618 UBLCP1Q8WVY7 318 aaPredicted RBP8.05□□□□□ -1.12
SF3A1-208ENST00000485618 ATL1Q8WXF7 558 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 FAM136AQ96C01 138 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 PDLIM5Q96HC4 596 aaKnown RBP8.05□□□□□ -1.12
SF3A1-208ENST00000485618 RMDN2Q96LZ7 410 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 NDNQ99608 321 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 RBBP8Q99708 897 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 CMKLR1Q99788 373 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 WDR83Q9BRX9 315 aaKnown RBP8.05□□□□□ -1.12
SF3A1-208ENST00000485618 FUT8Q9BYC5 575 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 RAB33BQ9H082 229 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 ANKZF1Q9H8Y5 726 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 GPAMQ9HCL2 828 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 HRASLS2Q9NWW9 162 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 SCHIP1Q9P0W5 487 aaPredicted RBP8.05□□□□□ -1.12
SF3A1-208ENST00000485618 SLC24A2Q9UI40 661 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 CFAP20Q9Y6A4 193 aaKnown RBP8.05□□□□□ -1.12
SF3A1-208ENST00000485618 LRP4O75096 1905 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 PLXNB3Q9ULL4 1909 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 UNC13CQ8NB66 2214 aa8.05□□□□□ -1.12
SF3A1-208ENST00000485618 AKAP13Q12802 2813 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 MYLKQ15746 1914 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 IGHV1OR21-1A0A087WYE8 117 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 A0A087X1B8 175 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 LY6G6EA0A0G2JKS1 128 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 IQANK1A0A1B0GTG1 560 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 C2orf74A8MZ97 194 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 POC1B-GALNT4F8VUJ3 575 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 NTN3O00634 580 aaPredicted RBP8.04□□□□□ -1.12
SF3A1-208ENST00000485618 RIPK2O43353 540 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 B4GAT1O43505 415 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 DKK1O94907 266 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 FKBP9O95302 570 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 MATN4O95460 622 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 ITGA2BP08514 1039 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 SNRPAP09012 282 aaKnown RBP8.04□□□□□ -1.12
SF3A1-208ENST00000485618 ENO2P09104 434 aaPredicted RBP8.04□□□□□ -1.12
SF3A1-208ENST00000485618 TYRP1P17643 537 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 FDXRP22570 491 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 GABRB3P28472 473 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 CD1CP29017 333 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 CSTF2P33240 577 aaKnown RBP eCLIP8.04□□□□□ -1.12
SF3A1-208ENST00000485618 SERPINB8P50452 374 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 RAB28P51157 221 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 KPNA2P52292 529 aaKnown RBP8.04□□□□□ -1.12
SF3A1-208ENST00000485618 AP1S2P56377 157 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 INSM1Q01101 510 aaPredicted RBP8.04□□□□□ -1.12
SF3A1-208ENST00000485618 IFFO1Q0D2I5 559 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 PRKG2Q13237 762 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 SP140Q13342 867 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 FAM83EQ2M2I3 478 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 ERCC6LQ2NKX8 1250 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 ZNF658BQ4V348 819 aaPredicted RBP8.04□□□□□ -1.12
SF3A1-208ENST00000485618 ACSBG2Q5FVE4 666 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 PHF19Q5T6S3 580 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 MROH9Q5TGP6 573 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 HES3Q5TGS1 186 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 TMEM164Q5U3C3 297 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 ANKS6Q68DC2 871 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 PAQR3Q6TCH7 311 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 USP53Q70EK8 1073 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 TMPRSS7Q7RTY8 843 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 MARCH9Q86YJ5 346 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 CPNE9Q8IYJ1 553 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 LSMEM2Q8N112 164 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 DCBLD1Q8N8Z6 715 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 FBXO15Q8NCQ5 510 aaPredicted RBP8.04□□□□□ -1.12
SF3A1-208ENST00000485618 SPDYE1Q8NFV5 336 aaPredicted RBP8.04□□□□□ -1.12
SF3A1-208ENST00000485618 OR4E2Q8NGC2 313 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 CD200R1Q8TD46 325 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 NAT14Q8WUY8 206 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 SLC44A1Q8WWI5 657 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 PATE1Q8WXA2 126 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 ASB11Q8WXH4 323 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 LINGO1Q96FE5 620 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 ATXN7L3BQ96GX2 97 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 CABS1Q96KC9 395 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 CCDC138Q96M89 665 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 GPR22Q99680 433 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 HGH1Q9BTY7 390 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 PARD6BQ9BYG5 372 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 PCBD2Q9H0N5 130 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 PARVBQ9HBI1 364 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 PLAC1Q9HBJ0 212 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 NMRAL1Q9HBL8 299 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 INTS7Q9NVH2 962 aaKnown RBP8.04□□□□□ -1.12
SF3A1-208ENST00000485618 TOR4AQ9NXH8 423 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 SPATA7Q9P0W8 599 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 EPHA6Q9UF33 1036 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 ZNF180Q9UJW8 692 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 ACOT9Q9Y305 439 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 PSAT1Q9Y617 370 aa8.04□□□□□ -1.12
SF3A1-208ENST00000485618 U3KQA8 63 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms