RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 IGHV5-51A0A0C4DH38 117 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 KRT87PA6NCN2 255 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 C9orf172C9J069 976 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 MATN4O95460 622 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 C1orf105O95561 183 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 C1QAP02745 245 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 PKLRP30613 574 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 MLLT3P42568 568 aaPredicted RBP13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 MAGEA4P43358 317 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 BDKRB1P46663 353 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 SEPHS1P49903 392 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 CDKN2DP55273 166 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 KYNUQ16719 465 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 KLHL38Q2WGJ6 581 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 CCSMST1Q4G0I0 132 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 DNTTIP2Q5QJE6 756 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 CACHD1Q5VU97 1274 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 ARMC6Q6NXE6 501 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 DCUN1D3Q8IWE4 304 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 PALM2Q8IXS6 379 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 LRRN4CLQ8ND94 238 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 SNIP1Q8TAD8 396 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 KLHL6Q8WZ60 621 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 FGF11Q92914 225 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 USP7Q93009 1102 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 TWSG1Q9GZX9 223 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 FAM114A2Q9NRY5 505 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 SIDT1Q9NXL6 827 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 FOXJ2Q9P0K8 574 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 POMT2Q9UKY4 750 aa13.17□□□□□ -0.3
SOX2-OT-209ENST00000485035 TCRBV9S1A1TA0A576 114 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 GSAPA4D1B5 854 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 TLCD2A6NGC4 264 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 CXorf49A8MYA2 514 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 B4E171 279 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 PRAMEF10O60809 474 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 VPS26AO75436 327 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 RPN2P04844 631 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 ECHS1P30084 290 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 SLC5A2P31639 672 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 SHMT2P34897 504 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 TSPAN7P41732 249 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 PGGT1BP53609 377 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 TTLL9Q3SXZ7 439 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 FBXO38Q6PIJ6 1188 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 C3orf62Q6ZUJ4 267 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 STRA8Q7Z7C7 330 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 SLC26A11Q86WA9 606 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 CPNE9Q8IYJ1 553 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 GPATCH11Q8N954 259 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 LMNTD1Q8N9Z9 388 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 INPP5DQ92835 1189 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 SLC41A2Q96JW4 573 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 IL17FQ96PD4 163 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 CD180Q99467 661 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 MCMBPQ9BTE3 642 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 LRRC4CQ9HCJ2 640 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 SPHK1Q9NYA1 384 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 ACTR10Q9NZ32 417 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 OR6C2Q9NZP2 312 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 PCDHGA7Q9Y5G6 932 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 CHD8Q9HCK8 2581 aa13.16□□□□□ -0.3
SOX2-OT-209ENST00000485035 SRRM3A6NNA2 597 aaPredicted RBP13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 NVLO15381 856 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 CHRM5P08912 532 aaPredicted RBP13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 NELFEP18615 380 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 MCM3P25205 808 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 PRDX3P30048 256 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 PEBP1P30086 187 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 RAB28P51157 221 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 PCBP4P57723 403 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 SH3BP2P78314 561 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 MC2RQ01718 297 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 PRKAA1Q13131 559 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 UBAP2Q5T6F2 1119 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 HECTD2Q5U5R9 776 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 CYHR1Q6ZMK1 362 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 NEK10Q6ZWH5 1172 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 CYS1Q717R9 158 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 ZC3HC1Q86WB0 502 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 LINC01555Q8NAE3 123 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 FLVCR1-AS1Q8TAF5 88 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 IFT81Q8WYA0 676 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 UBXN4Q92575 508 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 FOPNLQ96NB1 174 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 TAAR9Q96RI9 348 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 OLFM1Q99784 485 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 CTRCQ99895 268 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 FAM129AQ9BZQ8 928 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 L2HGDHQ9H9P8 463 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 APMAPQ9HDC9 416 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 SLC39A1Q9NY26 324 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 TAS2R13Q9NYV9 303 aa13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 TRMT6Q9UJA5 497 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 CORO1CQ9ULV4 474 aaPredicted RBP13.15□□□□□ -0.3
SOX2-OT-209ENST00000485035 PIPSLA2A3N6 862 aa13.14□□□□□ -0.31
SOX2-OT-209ENST00000485035 FAM159BA6NKW6 160 aa13.14□□□□□ -0.31
SOX2-OT-209ENST00000485035 ARHGEF33A8MVX0 844 aa13.14□□□□□ -0.31
SOX2-OT-209ENST00000485035 C2orf74A8MZ97 194 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms