RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 CCL27Q9Y4X3 112 aa13.7□□□□□ -0.22
CLK3-204ENST00000483723 SZT2Q5T011 3432 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 PABPN1LA6NDY0 278 aaKnown RBP13.69□□□□□ -0.22
CLK3-204ENST00000483723 C10orf142B7Z368 130 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 PSMD12O00232 456 aaPredicted RBP13.69□□□□□ -0.22
CLK3-204ENST00000483723 C1orf105O95561 183 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 ITGAXP20702 1163 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 MAP4P27816 1152 aaKnown RBP13.69□□□□□ -0.22
CLK3-204ENST00000483723 PBLDP30039 288 aaPredicted RBP13.69□□□□□ -0.22
CLK3-204ENST00000483723 PGM1P36871 562 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 HTR6P50406 440 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 SLC25A3Q00325 362 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 SGCGQ13326 291 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 TDGQ13569 410 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 GSTA3Q16772 222 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 TTC31Q49AM3 519 aaPredicted RBP13.69□□□□□ -0.22
CLK3-204ENST00000483723 TCHHL1Q5QJ38 904 aaPredicted RBP13.69□□□□□ -0.22
CLK3-204ENST00000483723 WASHC2DQ5SRD0 308 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 LRRTM4Q86VH4 590 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 ARHGAP24Q8N264 748 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 DCBLD1Q8N8Z6 715 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 L3MBTL4Q8NA19 623 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 RPLP0P6Q8NHW5 317 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 PKP4Q99569 1192 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 SLC29A3Q9BZD2 475 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 OR52A5Q9H2C5 316 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 RIC8BQ9NVN3 520 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 NCKAP1Q9Y2A7 1128 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 RNF11Q9Y3C5 154 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 GPR45Q9Y5Y3 372 aa13.69□□□□□ -0.22
CLK3-204ENST00000483723 KCNE1BA0A087WTH5 132 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 KLHL33A6NCF5 533 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 A8MUI8 341 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 WFS1O76024 890 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 CLDN9O95484 217 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 HMOX2P30519 316 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 FASTKQ14296 549 aaKnown RBP13.68□□□□□ -0.22
CLK3-204ENST00000483723 MAPRE2Q15555 327 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
CLK3-204ENST00000483723 SMU1Q2TAY7 513 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 CCSMST1Q4G0I0 132 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 C6orf136Q5SQH8 315 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 PGM2L1Q6PCE3 622 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 FAM83HQ6ZRV2 1179 aaPredicted RBP13.68□□□□□ -0.22
CLK3-204ENST00000483723 TRIM46Q7Z4K8 759 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 FUNDC1Q8IVP5 155 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 PARP9Q8IXQ6 854 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 SFRP1Q8N474 314 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 OR56A3Q8NH54 315 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 CFAP61Q8NHU2 1237 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 FOXJ1Q92949 421 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 USP7Q93009 1102 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 MCUR1Q96AQ8 359 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 C1QTNF7Q9BXJ2 289 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 ZDHHC5Q9C0B5 715 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 SDR39U1Q9NRG7 319 aaPredicted RBP13.68□□□□□ -0.22
CLK3-204ENST00000483723 PHPT1Q9NRX4 125 aaPredicted RBP13.68□□□□□ -0.22
CLK3-204ENST00000483723 DNAJC11Q9NVH1 559 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 TMEM45AQ9NWC5 275 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 STOX2Q9P2F5 926 aaPredicted RBP13.68□□□□□ -0.22
CLK3-204ENST00000483723 FAM8A1Q9UBU6 413 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 GIMAP2Q9UG22 337 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 SLC23A2Q9UGH3 650 aa13.68□□□□□ -0.22
CLK3-204ENST00000483723 A0A088AWK7 358 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 SERTM1A2A2V5 107 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 MEI4A8MW99 385 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 KMOO15229 486 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 PRAMEF4O60810 478 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 HOXC4P09017 264 aaPredicted RBP13.67□□□□□ -0.22
CLK3-204ENST00000483723 MYCLP1P12525 358 aaPredicted RBP13.67□□□□□ -0.22
CLK3-204ENST00000483723 EZRP15311 586 aaKnown RBP13.67□□□□□ -0.22
CLK3-204ENST00000483723 MXRA7P84157 204 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 DMPKQ09013 629 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 CUL3Q13618 768 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 NFE2L1Q14494 772 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 ABRAXAS2Q15018 415 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 LEXMQ3ZCV2 418 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 AGKQ53H12 422 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 PRAMEF9Q5VWM5 478 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 METRNLQ641Q3 311 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 AGTRAPQ6RW13 159 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 CRTC3Q6UUV7 619 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 IL27RAQ6UWB1 636 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 SCIMPQ6UWF3 145 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 AMZ2Q86W34 360 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 SCUBE1Q8IWY4 988 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 KLK6Q92876 244 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 MAGEB10Q96LZ2 347 aaPredicted RBP13.67□□□□□ -0.22
CLK3-204ENST00000483723 OSBPL6Q9BZF3 934 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 ATG10Q9H0Y0 220 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 WDR26Q9H7D7 661 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 RMI1Q9H9A7 625 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 EFCAB1Q9HAE3 211 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 INTS7Q9NVH2 962 aaKnown RBP13.67□□□□□ -0.22
CLK3-204ENST00000483723 AIG1Q9NVV5 245 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 SLC22A14Q9Y267 594 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 TBC1D3DA0A087WVF3 549 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 TBC1D3IA0A087WXS9 549 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 TBC1D3EA0A087X179 549 aa13.67□□□□□ -0.22
CLK3-204ENST00000483723 TBC1D3KA0A087X1G2 549 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms