RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 CNTN1Q12860 1018 aa12.92□□□□□ -0.34
CPNE1-225ENST00000483495 TRAP1Q12931 704 aaKnown RBP12.92□□□□□ -0.34
CPNE1-225ENST00000483495 TRIM25Q14258 630 aaKnown RBP12.92□□□□□ -0.34
CPNE1-225ENST00000483495 AP5B1Q2VPB7 878 aa12.92□□□□□ -0.34
CPNE1-225ENST00000483495 SYTL3Q4VX76 610 aa12.92□□□□□ -0.34
CPNE1-225ENST00000483495 SAMD4BQ5PRF9 694 aaKnown RBP12.92□□□□□ -0.34
CPNE1-225ENST00000483495 NEK5Q6P3R8 708 aa12.92□□□□□ -0.34
CPNE1-225ENST00000483495 DHDDSQ86SQ9 333 aa12.92□□□□□ -0.34
CPNE1-225ENST00000483495 LINC00615Q96LM1 132 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-225ENST00000483495 MAGEB10Q96LZ2 347 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-225ENST00000483495 TRMT61BQ9BVS5 477 aaKnown RBP12.92□□□□□ -0.34
CPNE1-225ENST00000483495 TRIM39Q9HCM9 518 aa12.92□□□□□ -0.34
CPNE1-225ENST00000483495 DNAJC11Q9NVH1 559 aa12.92□□□□□ -0.34
CPNE1-225ENST00000483495 GID8Q9NWU2 228 aa12.92□□□□□ -0.34
CPNE1-225ENST00000483495 ASIC5Q9NY37 505 aa12.92□□□□□ -0.34
CPNE1-225ENST00000483495 KLQ9UEF7 1012 aa12.92□□□□□ -0.34
CPNE1-225ENST00000483495 STON1Q9Y6Q2 735 aa12.92□□□□□ -0.34
CPNE1-225ENST00000483495 ASPDHA6ND91 283 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 PRORSD1PA6NEY8 169 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 LIN7AO14910 233 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-225ENST00000483495 NPC1O15118 1278 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 MAP3K7O43318 606 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 AP1G1O43747 822 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 KRT6AP02538 564 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 KRT6BP04259 564 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 IL12AP29459 219 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 DRD3P35462 400 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 KRT6CP48668 564 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 POLR2JP52435 117 aaKnown RBP12.91□□□□□ -0.34
CPNE1-225ENST00000483495 PFN3P60673 137 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 CAMK2GQ13555 558 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-225ENST00000483495 SPATS1Q496A3 300 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 RFTN2Q52LD8 501 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-225ENST00000483495 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.91□□□□□ -0.34
CPNE1-225ENST00000483495 RAET1GQ6H3X3 334 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 ZFP1Q6P2D0 407 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 ZFAND4Q86XD8 727 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 GALNT13Q8IUC8 556 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 RNF148Q8N7C7 305 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 FBXO15Q8NCQ5 510 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-225ENST00000483495 CXorf40AQ8TE69 158 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 ZNF514Q96K75 400 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-225ENST00000483495 CCDC138Q96M89 665 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 ZNF570Q96NI8 536 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 HBEGFQ99075 208 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 RSPH9Q9H1X1 276 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-225ENST00000483495 ACTL8Q9H568 366 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 ACTR8Q9H981 624 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 ZNF490Q9ULM2 529 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-225ENST00000483495 SERTM1A2A2V5 107 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 C9JVG2 144 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 NPIPB8E9PQR5 432 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 FFAR3O14843 346 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 GPR42O15529 346 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 BAG2O95816 211 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 CATP04040 527 aaKnown RBP12.91□□□□□ -0.34
CPNE1-225ENST00000483495 G6PDP11413 515 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 JAK1P23458 1154 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 MAP4P27816 1152 aaKnown RBP12.91□□□□□ -0.34
CPNE1-225ENST00000483495 PREPP48147 710 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 CCR3P51677 355 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 PCDH1Q08174 1060 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 ABRQ12979 859 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 PRKG2Q13237 762 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 MAD2L1Q13257 205 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-225ENST00000483495 TLR1Q15399 786 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 IL23RQ5VWK5 629 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 CYP20A1Q6UW02 462 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 LAYNQ6UX15 382 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 LILRA3Q8N6C8 439 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-225ENST00000483495 PPFIBP2Q8ND30 876 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 HIPK4Q8NE63 616 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 ATL1Q8WXF7 558 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 DNAJC9Q8WXX5 260 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 LRRC58Q96CX6 371 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 RIPOR3Q96MK2 946 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 RPP25Q9BUL9 199 aaKnown RBP12.91□□□□□ -0.34
CPNE1-225ENST00000483495 ZDHHC4Q9NPG8 344 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 FARSBQ9NSD9 589 aaKnown RBP12.91□□□□□ -0.34
CPNE1-225ENST00000483495 MCM8Q9UJA3 840 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 PSMD13Q9UNM6 376 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 GPR34Q9UPC5 381 aa12.91□□□□□ -0.34
CPNE1-225ENST00000483495 C17orf113A0A1B0GUU1 675 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 CCDC154A6NI56 674 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 IFRD1O00458 451 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-225ENST00000483495 VEGFDO43915 354 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 UGDHO60701 494 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 NPPAP01160 153 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 ACADSP16219 412 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 PRPH2P23942 346 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 MSX2P35548 267 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-225ENST00000483495 TNFRSF4P43489 277 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 GNPDA1P46926 289 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 SLC7A2P52569 658 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 TAF11Q15544 211 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 XKR5Q6UX68 686 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 ADAMTSL4Q6UY14 1074 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 TRIM74Q86UV6 250 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 RGL4Q8IZJ4 473 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 BHLHE22Q8NFJ8 381 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms