RNA–Protein interactions for RNA: ENST00000483344.1

FNDC3B-210, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-210ENST00000483344 LIMK1P53667 647 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 CX3CL1P78423 397 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 ACSM1Q08AH1 577 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 TFCP2Q12800 502 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 DMP1Q13316 513 aaPredicted RBP4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 ZRSR1Q15695 479 aaKnown RBP4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 PRR27Q6MZM9 219 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 MFSD12Q6NUT3 480 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 IL27RAQ6UWB1 636 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 ADCK2Q7Z695 626 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 PLD3Q8IV08 490 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 CFAP206Q8IYR0 622 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 ARHGAP24Q8N264 748 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 TRIML1Q8N9V2 468 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 OR2T12Q8NG77 320 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 CCDC107Q8WV48 283 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 SSMEM1Q8WWF3 244 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 SYN2Q92777 582 aaPredicted RBP4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 MOB3AQ96BX8 217 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 NAF1Q96HR8 494 aaKnown RBP4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 ZNF558Q96NG5 402 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 LRRC3BQ96PB8 259 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 MYADMQ96S97 322 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 TRAF4Q9BUZ4 470 aaPredicted RBP4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 TRMT61BQ9BVS5 477 aaKnown RBP4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 ARRDC1-AS1Q9H2J1 176 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 MYNNQ9NPC7 610 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 SERINC1Q9NRX5 453 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 ZFP57Q9NU63 452 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 FAM118AQ9NWS6 357 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 B3GAT1Q9P2W7 334 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 KCNG2Q9UJ96 466 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 SLC7A7Q9UM01 511 aa4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 SOS1Q07889 1333 aaPredicted RBP4.11□□□□□ -1.75
FNDC3B-210ENST00000483344 AQRO60306 1485 aaKnown RBP eCLIP4.11□□□□□ -1.752e-8■■■■■ 29.6
FNDC3B-210ENST00000483344 CHD1O14646 1710 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 A0A1W2PRQ8 180 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 OR6C76A6NM76 312 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 CLDN4O14493 209 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 PTGESO14684 152 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 PRKNO60260 465 aaPredicted RBP4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 RNASEH1O60930 286 aaKnown RBP4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 PENKP01210 267 aaPredicted RBP4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 IGHV2-70P01814 119 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 NR3C1P04150 777 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 FGF5P12034 268 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 SCG2P13521 617 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 GNAZP19086 355 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 NR1D1P20393 614 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 MPZP25189 248 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 EPHA2P29317 976 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 PDX1P52945 283 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 ARL16Q0P5N6 197 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 CORO6Q6QEF8 472 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 TMPRSS11BQ86T26 416 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 ZNF554Q86TJ5 538 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 THNSL1Q8IYQ7 743 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 OR13J1Q8NGT2 312 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 SPSB1Q96BD6 273 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 DHX58Q96C10 678 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 SPATA17Q96L03 361 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 GBP5Q96PP8 586 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 SPAG5Q96R06 1193 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 EGFL8Q99944 293 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 RTP3Q9BQQ7 232 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 FAM129AQ9BZQ8 928 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 PELI2Q9HAT8 420 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 Q9N2K0 584 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 ZNF580Q9UK33 172 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 RNF150Q9ULK6 438 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 LIPGQ9Y5X9 500 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 WIZO95785 1651 aa4.1□□□□□ -1.75
FNDC3B-210ENST00000483344 FAM172BPA6NC97 362 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 NEMP2A6NFY4 417 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 FGF17O60258 216 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 CYP11B2P19099 503 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 PTPN3P26045 913 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 MAPK12P53778 367 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 DLX5P56178 289 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 DMPKQ09013 629 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 PPIGQ13427 754 aaKnown RBP eCLIP4.09□□□□□ -1.752e-10■□□□□ 10.1
FNDC3B-210ENST00000483344 SYT14P1Q58G82 188 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 FAM76BQ5HYJ3 339 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 ELFN2Q5R3F8 820 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 RUSC1-AS1Q66K80 236 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 PPP1R21Q6ZMI0 780 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 C18orf65Q6ZTR6 163 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 FAM47EQ6ZV65 393 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 ANO5Q75V66 913 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 ARHGAP22Q7Z5H3 698 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 FOXP4Q8IVH2 680 aaPredicted RBP4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 CIARTQ8N365 385 aaPredicted RBP4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 ZNF611Q8N823 705 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 LMNTD1Q8N9Z9 388 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 IQUBQ8NA54 791 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 NPEPL1Q8NDH3 523 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 FGFBP3Q8TAT2 258 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 IRGQQ8WZA9 623 aa4.09□□□□□ -1.75
FNDC3B-210ENST00000483344 ALG14Q96F25 216 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms