RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 MED16Q9Y2X0 877 aa16.11■□□□□ 0.17
HMGN1-214ENST00000482733 FREM2Q5SZK8 3169 aa16.11■□□□□ 0.17
HMGN1-214ENST00000482733 PMS2P1A4D2B8 440 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 EFCAB7A8K855 629 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 C2orf74A8MZ97 194 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 NVLO15381 856 aaKnown RBP16.1■□□□□ 0.17
HMGN1-214ENST00000482733 SPAG6O75602 509 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 MATN4O95460 622 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 FGF3P11487 239 aaPredicted RBP16.1■□□□□ 0.17
HMGN1-214ENST00000482733 POLR2CP19387 275 aaPredicted RBP16.1■□□□□ 0.17
HMGN1-214ENST00000482733 ITIH1P19827 911 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 MAPK10P53779 464 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 PCBP4P57723 403 aaKnown RBP16.1■□□□□ 0.17
HMGN1-214ENST00000482733 KYNUQ16719 465 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 ST3GAL2Q16842 350 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 ACSBG2Q5FVE4 666 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 LRRC8EQ6NSJ5 796 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 CYB5D1Q6P9G0 228 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 C3orf62Q6ZUJ4 267 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 FAM129CQ86XR2 697 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 RAB42Q8N4Z0 105 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 SIDT2Q8NBJ9 832 aaKnown RBP16.1■□□□□ 0.17
HMGN1-214ENST00000482733 GPR21Q99679 349 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 RAB11FIP5Q9BXF6 653 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 ASPSCR1Q9BZE9 553 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 GALPQ9UBC7 116 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 POMT2Q9UKY4 750 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 ZMIZ1Q9ULJ6 1067 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 ICKQ9UPZ9 632 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 PCDHGA3Q9Y5H0 932 aa16.1■□□□□ 0.17
HMGN1-214ENST00000482733 GSAPA4D1B5 854 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 AGRPO00253 132 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 BTN3A3O00478 584 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 BTN3A1O00481 513 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 KIF1CO43896 1103 aaKnown RBP16.09■□□□□ 0.17
HMGN1-214ENST00000482733 C1orf105O95561 183 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 MPC1LP0DKB6 136 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 CCL4P13236 92 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 CD82P27701 267 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 SSTR1P30872 391 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 ETV5P41161 510 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 RAB28P51157 221 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 PPP1CAP62136 330 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 MC2RQ01718 297 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 KLHL38Q2WGJ6 581 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 FAM45BPQ6NSW5 357 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 CAPN12Q6ZSI9 719 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 STRA8Q7Z7C7 330 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 ADGRF3Q8IZF5 1079 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 BMPERQ8N8U9 685 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 GIMAP7Q8NHV1 300 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 FAM45AQ8TCE6 357 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 CD200R1Q8TD46 325 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 USP7Q93009 1102 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 TEFMQ96QE5 360 aaKnown RBP16.09■□□□□ 0.17
HMGN1-214ENST00000482733 NDNQ99608 321 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 ZPBPQ9BS86 351 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 DDA1Q9BW61 102 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 XKR8Q9H6D3 395 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 FBXO8Q9NRD0 319 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 C1GALT1Q9NS00 363 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 OCIAD1Q9NX40 245 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 SLC39A1Q9NY26 324 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 SLC17A6Q9P2U8 582 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 ACSL6Q9UKU0 697 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 SLC39A10Q9ULF5 831 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 VWA7Q9Y334 891 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 TPRP12270 2363 aaKnown RBP16.09■□□□□ 0.17
HMGN1-214ENST00000482733 PIKFYVEQ9Y2I7 2098 aa16.09■□□□□ 0.17
HMGN1-214ENST00000482733 WDFY3Q8IZQ1 3526 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 TCRBV9S1A1TA0A576 114 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 PIPSLA2A3N6 862 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 TAF4O00268 1085 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 RRP8O43159 456 aaKnown RBP16.08■□□□□ 0.16
HMGN1-214ENST00000482733 ZBTB11O95625 1053 aaPredicted RBP16.08■□□□□ 0.16
HMGN1-214ENST00000482733 CATP04040 527 aaKnown RBP16.08■□□□□ 0.16
HMGN1-214ENST00000482733 NELFEP18615 380 aaKnown RBP16.08■□□□□ 0.16
HMGN1-214ENST00000482733 PKLRP30613 574 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 SLC5A2P31639 672 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 STX2P32856 288 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 ARL4DP49703 201 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 RGS4P49798 205 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 SEPHS1P49903 392 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 KPNA2P52292 529 aaKnown RBP16.08■□□□□ 0.16
HMGN1-214ENST00000482733 CUL1Q13616 776 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 DCAF12Q5T6F0 453 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 HECTD2Q5U5R9 776 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 GPATCH11Q8N954 259 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 ZNF248Q8NDW4 579 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 IFT81Q8WYA0 676 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 SLC41A2Q96JW4 573 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 SLC30A3Q99726 388 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 MAP3K3Q99759 626 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 L2HGDHQ9H9P8 463 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 SIDT1Q9NXL6 827 aaKnown RBP16.08■□□□□ 0.16
HMGN1-214ENST00000482733 ACTR10Q9NZ32 417 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 TXNDC16Q9P2K2 825 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 RAXQ9Y2V3 346 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 PCDHB11Q9Y5F2 797 aa16.08■□□□□ 0.16
HMGN1-214ENST00000482733 NFS1Q9Y697 457 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms