RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 LEPRP48357 1165 aaKnown RBP4.05□□□□□ -1.76
VPS41-212ENST00000482217 CAMPP49913 170 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 CDK7P50613 346 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 AIF1P55008 147 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 SRP54P61011 504 aaKnown RBP4.05□□□□□ -1.76
VPS41-212ENST00000482217 NIPAL4Q0D2K0 466 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 FOXI1Q12951 378 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 PDZK1IP1Q13113 114 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 ZNF169Q14929 603 aaPredicted RBP4.05□□□□□ -1.76
VPS41-212ENST00000482217 IFI44LQ53G44 452 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 PIP5KL1Q5T9C9 394 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 DENND2CQ68D51 928 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 LAIR1Q6GTX8 287 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 MSANTD2Q6P1R3 559 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 SLC27A1Q6PCB7 646 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 TMEM182Q6ZP80 229 aaPredicted RBP4.05□□□□□ -1.76
VPS41-212ENST00000482217 Q6ZPA2 131 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 CFAP77Q6ZQR2 320 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 Q6ZWC4 215 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 ZNF627Q7L945 461 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 MRGPRGQ86SM5 289 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 RTN4RL2Q86UN3 420 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 TRABD2AQ86V40 505 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 FAM228AQ86W67 206 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 NRROSQ86YC3 692 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 ZDHHC21Q8IVQ6 265 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 CFAP206Q8IYR0 622 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 PM20D2Q8IYS1 436 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 LRRC34Q8IZ02 419 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 DSELQ8IZU8 1212 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 METTL25Q8N6Q8 603 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 C11orf44Q8N8P7 122 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 BEND2Q8NDZ0 799 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 BPIFCQ8NFQ6 507 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 PHOSPHO2Q8TCD6 241 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 PTPMT1Q8WUK0 201 aaPredicted RBP4.05□□□□□ -1.76
VPS41-212ENST00000482217 WDR60Q8WVS4 1066 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 MIB2Q96AX9 1013 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 ISG20Q96AZ6 181 aaKnown RBP4.05□□□□□ -1.76
VPS41-212ENST00000482217 CTHRC1Q96CG8 243 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 DAZAP1Q96EP5 407 aaKnown RBP4.05□□□□□ -1.76
VPS41-212ENST00000482217 C14orf79Q96F83 325 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 NSMCE2Q96MF7 247 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 LRFN5Q96NI6 719 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 PLIN2Q99541 437 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 ZNF416Q9BWM5 594 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 TSGA10Q9BZW7 698 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 CDT1Q9H211 546 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 HRH4Q9H3N8 390 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 CNOT10Q9H9A5 744 aaKnown RBP4.05□□□□□ -1.76
VPS41-212ENST00000482217 UCK1Q9HA47 277 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 GPN1Q9HCN4 374 aaPredicted RBP4.05□□□□□ -1.76
VPS41-212ENST00000482217 FAM118AQ9NWS6 357 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 SPG21Q9NZD8 308 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 OGFRQ9NZT2 677 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 MPP6Q9NZW5 540 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 FOXJ2Q9P0K8 574 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 DBF4Q9UBU7 674 aaPredicted RBP4.05□□□□□ -1.76
VPS41-212ENST00000482217 CCNL1Q9UK58 526 aaPredicted RBP4.05□□□□□ -1.76
VPS41-212ENST00000482217 PACSIN3Q9UKS6 424 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 NFU1Q9UMS0 254 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 NIP7Q9Y221 180 aaKnown RBP eCLIP4.05□□□□□ -1.76
VPS41-212ENST00000482217 SLC22A14Q9Y267 594 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 ENTPD2Q9Y5L3 495 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 DMRT1Q9Y5R6 373 aa4.05□□□□□ -1.76
VPS41-212ENST00000482217 COPG1Q9Y678 874 aaKnown RBP4.05□□□□□ -1.76
VPS41-212ENST00000482217 PFASO15067 1338 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 ASTN2O75129 1339 aaPredicted RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 UBE4BO95155 1302 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 A0A087X1B8 175 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 A0A1B0GVM2 712 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 IQCF5A8MTL0 148 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 TTC34A8MYJ7 566 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 K7EQM0 130 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 MAP2K7O14733 419 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 ALOX15BO15296 676 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 FOXN1O15353 648 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 TLX2O43763 284 aaPredicted RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 TMPRSS11DO60235 418 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 KLK8O60259 260 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 MED24O75448 989 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 ENO1P06733 434 aaKnown RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 SBK2P0C263 348 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 PRPS2P11908 318 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 TCF4P15884 667 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 CREB1P16220 341 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 CYP2B6P20813 491 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 TCEA1P23193 301 aaKnown RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 CTGFP29279 349 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 LCN1P31025 176 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 CYP2C18P33260 490 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 PNPLA4P41247 253 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 ALDH7A1P49419 539 aaKnown RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 SLC26A2P50443 739 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 SERPINH1P50454 418 aaKnown RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 CRYBB1P53674 252 aaPredicted RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 ARPC4P59998 168 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 GPC5P78333 572 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 EFNB1P98172 346 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 GALK2Q01415 458 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms