RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 MARCH4Q9P2E8 410 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 ANAPC2Q9UJX6 822 aa9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 FARSAQ9Y285 508 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 HEMK1Q9Y5R4 338 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-207ENST00000482162 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 PIPSLA2A3N6 862 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 CCDC78A2IDD5 438 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 F8W8V4 182 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 K7EM74 188 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 AP3B1O00203 1094 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 HCRTR1O43613 425 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 KATNA1O75449 491 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 CHRM5P08912 532 aaPredicted RBP9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 PVRP15151 417 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 CDH3P22223 829 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 GCGRP47871 477 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 NPY2RP49146 381 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 KYNUQ16719 465 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 PRAMEF17Q5VTA0 474 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 PAPD7Q5XG87 772 aaKnown RBP9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 SPESP1Q6UW49 350 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 PPP1R21Q6ZMI0 780 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 PRICKLE2Q7Z3G6 844 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 TMEM135Q86UB9 458 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 TMEM126BQ8IUX1 230 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 VRK3Q8IV63 474 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 MPP5Q8N3R9 675 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 DNAJC22Q8N4W6 341 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 CCDC89Q8N998 374 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 TRIM58Q8NG06 486 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 MAIP1Q8WWC4 291 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 ASZ1Q8WWH4 475 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 ELMO1Q92556 727 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.4□□□□□ -0.91e-7■■■■■ 35.3
TMEM39A-207ENST00000482162 RNF31Q96EP0 1072 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 TCTN2Q96GX1 697 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 DPH2Q9BQC3 489 aaPredicted RBP9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 HGH1Q9BTY7 390 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 NLNQ9BYT8 704 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 IL22Q9GZX6 179 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 MRM3Q9HC36 420 aaKnown RBP9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 HOMER3Q9NSC5 361 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 SPHK1Q9NYA1 384 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 SERTAD3Q9UJW9 196 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 ASF1AQ9Y294 204 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 NEU2Q9Y3R4 380 aa9.4□□□□□ -0.9
TMEM39A-207ENST00000482162 BSNQ9UPA5 3926 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 FLNCQ14315 2725 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 GSAPA4D1B5 854 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 E7EVH7 732 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 PRMT5O14744 637 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 CD3EAPO15446 510 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 PRICKLE3O43900 615 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 CEACAM4O75871 244 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 ONECUT2O95948 504 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 FGGP02679 453 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 KLK3P07288 261 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 UGT2B7P16662 529 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 TPSB2P20231 275 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 RPS3P23396 243 aaKnown RBP eCLIP9.39□□□□□ -0.915e-7■□□□□ 10.4
TMEM39A-207ENST00000482162 PEBP1P30086 187 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 PPARGP37231 505 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 TTPAP49638 278 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 ADARP55265 1226 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 RPS15P62841 145 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 IL10RAQ13651 578 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 GBX1Q14549 363 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 KIR2DS3Q14952 304 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 TPSAB1Q15661 275 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 SLC5A12Q1EHB4 618 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 FASTKD1Q53R41 847 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 AARS2Q5JTZ9 985 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 LRRC8BQ6P9F7 803 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 FAM198BQ6UWH4 519 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 UNC5DQ6UXZ4 953 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 NAPRTQ6XQN6 538 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 LRRC6Q86X45 466 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 PTRH1Q86Y79 214 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 OR6P1Q8NGX9 317 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 LKAAEAR1Q8TD35 194 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 MR1Q95460 341 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 LZTFL1Q9NQ48 299 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 ZNF71Q9NQZ8 489 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 SOHLH2Q9NX45 425 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 TLK1Q9UKI8 766 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 TCFL5Q9UL49 500 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 TTC7AQ9ULT0 858 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 AP1M2Q9Y6Q5 423 aa9.39□□□□□ -0.91
TMEM39A-207ENST00000482162 PTPN13Q12923 2485 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 RP1L1Q8IWN7 2480 aaPredicted RBP9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 TCRBV7S3A2A0A539 114 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 CDC14CA4D256 554 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 CLEC18AA5D8T8 446 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 IQCF5A8MTL0 148 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 TMEM150CB9EJG8 249 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 MKRN2OSH3BPM6 223 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 MAP3K7O43318 606 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 ZNF749O43361 778 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 RFPL1O75677 317 aa9.38□□□□□ -0.91
TMEM39A-207ENST00000482162 KLF7O75840 302 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms