RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 ETV5P41161 510 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 FXR2P51116 673 aaKnown RBP eCLIP10.17□□□□□ -0.782e-9■■□□□ 14.2
PRPF4B-206ENST00000481109 ACTR1AP61163 376 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 HNRNPKP61978 463 aaKnown RBP eCLIP10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 PSMC6P62333 389 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 ROR1Q01973 937 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 SCN1BQ07699 218 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 PUM3Q15397 648 aaKnown RBP10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 RNF212Q495C1 297 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 MAP1SQ66K74 1059 aaPredicted RBP10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 FAM45BPQ6NSW5 357 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 C8orf82Q6P1X6 216 aaPredicted RBP10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 C17orf107Q6ZR85 190 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 MCATQ8IVS2 390 aaKnown RBP10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 OR8H2Q8N162 312 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 ZNF540Q8NDQ6 660 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 IPMKQ8NFU5 416 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 FAM45AQ8TCE6 357 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 NTAN1Q96AB6 310 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 NECTIN4Q96NY8 510 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 FTHL17Q9BXU8 183 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 MMP28Q9H239 520 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 RHBGQ9H310 441 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 SMOC2Q9H3U7 446 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 ALG2Q9H553 416 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 C14orf119Q9NWQ9 140 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 TREM2Q9NZC2 230 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 MID2Q9UJV3 735 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 DNPEPQ9ULA0 475 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 NIP7Q9Y221 180 aaKnown RBP eCLIP10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 CRYL1Q9Y2S2 319 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 MAGED1Q9Y5V3 778 aaPredicted RBP10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 DLEC1Q9Y238 1755 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 A0A075B6Q4 140 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 WTIPA6NIX2 430 aaPredicted RBP10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 HRGP04196 525 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 THRBP10828 461 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 CSF2RAP15509 400 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 GJA1P17302 382 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 SLC1A3P43003 542 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 GLUD2P49448 558 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 RRAS2P62070 204 aaPredicted RBP10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 PPP3CAQ08209 521 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 CLN3Q13286 438 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 TEAD4Q15561 434 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 MARCH8Q5T0T0 291 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 SLC35F1Q5T1Q4 408 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 C9orf131Q5VYM1 1079 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 ACAD10Q6JQN1 1059 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 USP17L1Q7RTZ2 530 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 SIAH1Q8IUQ4 282 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 CENPLQ8N0S6 344 aaPredicted RBP10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 NAGSQ8N159 534 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 MARCH10Q8NA82 808 aaPredicted RBP10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 PNMA1Q8ND90 353 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 ZNF431Q8TF32 576 aaPredicted RBP10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 SLC20A1Q8WUM9 679 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 FBLIM1Q8WUP2 373 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 UGT2B28Q9BY64 529 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 SOX17Q9H6I2 414 aaPredicted RBP10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 STAP1Q9ULZ2 295 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 RUVBL2Q9Y230 463 aaKnown RBP10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 PCDHA8Q9Y5H6 950 aa10.17□□□□□ -0.78
PRPF4B-206ENST00000481109 FAM149AA5PLN7 773 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 MYL12BO14950 172 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 ADAMTS3O15072 1205 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 PEX10O60683 326 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 H2AFYO75367 372 aaKnown RBP10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 AKAP3O75969 853 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 WDR47O94967 919 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 FGF2P09038 288 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 MYL12AP19105 171 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 PTBP1P26599 531 aaKnown RBP eCLIP10.16□□□□□ -0.787e-12■■■■■ 32.1
PRPF4B-206ENST00000481109 ARRB2P32121 409 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 LIPAP38571 399 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 RFC3P40938 356 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 ZNF143P52747 638 aaPredicted RBP10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 ATXN1P54253 815 aaKnown RBP10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 DMP1Q13316 513 aaPredicted RBP10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 IL18R1Q13478 541 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 RAPSNQ13702 412 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 DSG2Q14126 1118 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 TARBP2Q15633 366 aaKnown RBP10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 LRRC8EQ6NSJ5 796 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 ANKRD54Q6NXT1 300 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 ERICH5Q6P6B1 374 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 NOTUMQ6P988 496 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 SLC16A13Q7RTY0 426 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 ZC3HC1Q86WB0 502 aaKnown RBP10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 C12orf45Q8N5I9 185 aaPredicted RBP10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 LRRC17Q8N6Y2 441 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 SLC38A4Q969I6 547 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 ZC3HAV1LQ96H79 300 aaKnown RBP10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 GMCL1Q96IK5 515 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 RBP7Q96R05 134 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 NPAS2Q99743 824 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 APBA2Q99767 749 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 TBCDQ9BTW9 1192 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 MUC13Q9H3R2 512 aa10.16□□□□□ -0.78
PRPF4B-206ENST00000481109 C3orf14Q9HBI5 128 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms