RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ZNF574Q6ZN55 896 aaPredicted RBP19.17■□□□□ 0.66
LIME1-205ENST00000480139 AMIGO1Q86WK6 493 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 OOSP2Q86WS3 158 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 MYO1HQ8N1T3 1032 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 PAFAH2Q99487 392 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 MENTQ9BUN1 341 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 SCNM1Q9BWG6 230 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 RAB11FIP5Q9BXF6 653 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 EPB41L4BQ9H329 900 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 OR6C2Q9NZP2 312 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 FETUBQ9UGM5 382 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 ZNF180Q9UJW8 692 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 SLC39A10Q9ULF5 831 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 ICKQ9UPZ9 632 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 RUVBL2Q9Y230 463 aaKnown RBP19.17■□□□□ 0.66
LIME1-205ENST00000480139 TDRKHQ9Y2W6 561 aaKnown RBP19.17■□□□□ 0.66
LIME1-205ENST00000480139 ENTPD2Q9Y5L3 495 aa19.17■□□□□ 0.66
LIME1-205ENST00000480139 IGHV5-10-1A0A0J9YXX1 117 aa19.16■□□□□ 0.66
LIME1-205ENST00000480139 TOX3O15405 576 aaPredicted RBP19.16■□□□□ 0.66
LIME1-205ENST00000480139 WISP3O95389 354 aaPredicted RBP19.16■□□□□ 0.66
LIME1-205ENST00000480139 TOP3BO95985 862 aaKnown RBP19.16■□□□□ 0.66
LIME1-205ENST00000480139 HOXB3P14651 431 aaPredicted RBP19.16■□□□□ 0.66
LIME1-205ENST00000480139 STMN1P16949 149 aa19.16■□□□□ 0.66
LIME1-205ENST00000480139 RAB28P51157 221 aa19.16■□□□□ 0.66
LIME1-205ENST00000480139 TARDBPQ13148 414 aaKnown RBP eCLIP19.16■□□□□ 0.66
LIME1-205ENST00000480139 SP140Q13342 867 aa19.16■□□□□ 0.66
LIME1-205ENST00000480139 USP10Q14694 798 aaKnown RBP19.16■□□□□ 0.66
LIME1-205ENST00000480139 PIWIL4Q7Z3Z4 852 aaKnown RBP19.16■□□□□ 0.66
LIME1-205ENST00000480139 CEP97Q8IW35 865 aa19.16■□□□□ 0.66
LIME1-205ENST00000480139 CNPY4Q8N129 248 aa19.16■□□□□ 0.66
LIME1-205ENST00000480139 NKAPQ8N5F7 415 aaKnown RBP19.16■□□□□ 0.66
LIME1-205ENST00000480139 OR4E2Q8NGC2 313 aa19.16■□□□□ 0.66
LIME1-205ENST00000480139 AENQ8WTP8 325 aaKnown RBP19.16■□□□□ 0.66
LIME1-205ENST00000480139 JPH3Q8WXH2 748 aaPredicted RBP19.16■□□□□ 0.66
LIME1-205ENST00000480139 ANKRD7Q92527 254 aa19.16■□□□□ 0.66
LIME1-205ENST00000480139 LINGO1Q96FE5 620 aa19.16■□□□□ 0.66
LIME1-205ENST00000480139 ZDHHC12Q96GR4 267 aa19.16■□□□□ 0.66
LIME1-205ENST00000480139 LIN37Q96GY3 246 aaPredicted RBP19.16■□□□□ 0.66
LIME1-205ENST00000480139 ZMYND15Q9H091 742 aa19.16■□□□□ 0.66
LIME1-205ENST00000480139 RAB21Q9UL25 225 aa19.16■□□□□ 0.66
LIME1-205ENST00000480139 EXOC1LA0A1B0GW35 172 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 MED19A0JLT2 244 aaPredicted RBP19.15■□□□□ 0.66
LIME1-205ENST00000480139 OR6C74A6NCV1 312 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 ARHGEF33A8MVX0 844 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 MYO1CO00159 1063 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 RASGRF2O14827 1237 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 SLC16A5O15375 505 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 C8GP07360 202 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 INHBAP08476 426 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 ANKRD34CP0C6C1 535 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 SAT1P21673 171 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 CNTFP26441 200 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 PKLRP30613 574 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 PPM1FP49593 454 aaPredicted RBP19.15■□□□□ 0.66
LIME1-205ENST00000480139 SERPINB9P50453 376 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 RAB10P61026 200 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 SLC29A2Q14542 456 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.15■□□□□ 0.66
LIME1-205ENST00000480139 TMEM207Q6UWW9 146 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 TAOK1Q7L7X3 1001 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 CCDC91Q7Z6B0 441 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 B3GNT8Q7Z7M8 397 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 CARFQ8N187 725 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 CD180Q99467 661 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 DHRS4Q9BTZ2 278 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 PARD6BQ9BYG5 372 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 STRADBQ9C0K7 418 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 SEMA6CQ9H3T2 930 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 CAB39LQ9H9S4 337 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 GPAMQ9HCL2 828 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 HRASLS2Q9NWW9 162 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 SPATA7Q9P0W8 599 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 TSR3Q9UJK0 312 aaKnown RBP19.15■□□□□ 0.66
LIME1-205ENST00000480139 KLK13Q9UKR3 277 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 MSRB2Q9Y3D2 182 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 IKBKGQ9Y6K9 419 aa19.15■□□□□ 0.66
LIME1-205ENST00000480139 HMX2A2RU54 273 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 FAM149AA5PLN7 773 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 HGSO14964 777 aaPredicted RBP19.14■□□□□ 0.65
LIME1-205ENST00000480139 CAPN5O15484 640 aaPredicted RBP19.14■□□□□ 0.65
LIME1-205ENST00000480139 ZBTB14O43829 449 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 MSH2P43246 934 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 BDKRB1P46663 353 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 PGGT1BP53609 377 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 PRKAA1Q13131 559 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 EIF3IQ13347 325 aaKnown RBP19.14■□□□□ 0.65
LIME1-205ENST00000480139 CAMK2BQ13554 666 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 ZNF460Q14592 562 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 UAP1Q16222 522 aaPredicted RBP19.14■□□□□ 0.65
LIME1-205ENST00000480139 ADGRF3Q8IZF5 1079 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 RAB42Q8N4Z0 105 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 UHMK1Q8TAS1 419 aaKnown RBP19.14■□□□□ 0.65
LIME1-205ENST00000480139 HMGCLL1Q8TB92 370 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 CAVIN3Q969G5 261 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 CCDC74BQ96LY2 380 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 TMEM9Q9P0T7 183 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.14■□□□□ 0.65
LIME1-205ENST00000480139 SEMA5BQ9P283 1151 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 ANGPTL2Q9UKU9 493 aa19.14■□□□□ 0.65
LIME1-205ENST00000480139 NCOR2Q9Y618 2525 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms