RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 TENM1Q9UKZ4 2725 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 VSTM2BA6NLU5 285 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 FOXN3O00409 490 aaPredicted RBP11.34□□□□□ -0.59
USP11-208ENST00000480104 EEF2KO00418 725 aaKnown RBP11.34□□□□□ -0.59
USP11-208ENST00000480104 POP7O75817 140 aaKnown RBP11.34□□□□□ -0.59
USP11-208ENST00000480104 LSM8O95777 96 aaKnown RBP11.34□□□□□ -0.59
USP11-208ENST00000480104 ONECUT2O95948 504 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 SLC9A1P19634 815 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 PBLDP30039 288 aaPredicted RBP11.34□□□□□ -0.59
USP11-208ENST00000480104 MMP13P45452 471 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 CARSP49589 748 aaKnown RBP11.34□□□□□ -0.59
USP11-208ENST00000480104 ST13P50502 369 aaKnown RBP11.34□□□□□ -0.59
USP11-208ENST00000480104 DCDC1P59894 354 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 NOMO3P69849 1222 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 EEF1A2Q05639 463 aaKnown RBP11.34□□□□□ -0.59
USP11-208ENST00000480104 KLC1Q07866 573 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 CUL4AQ13619 759 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 GTF2H3Q13889 308 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 PDPK2PQ6A1A2 396 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 TXNRD3NBQ6F5E7 133 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 RIPOR1Q6ZS17 1223 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 CAPN12Q6ZSI9 719 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 NLRP9Q7RTR0 991 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.34□□□□□ -0.59
USP11-208ENST00000480104 YTHDF3Q7Z739 585 aaKnown RBP11.34□□□□□ -0.59
USP11-208ENST00000480104 MCATQ8IVS2 390 aaKnown RBP11.34□□□□□ -0.59
USP11-208ENST00000480104 BBS5Q8N3I7 341 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.34□□□□□ -0.59
USP11-208ENST00000480104 FAM222BQ8WU58 562 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 ZNF592Q92610 1267 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 TMEM125Q96AQ2 219 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 SCMH1Q96GD3 660 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 TDRD1Q9BXT4 1180 aaKnown RBP11.34□□□□□ -0.59
USP11-208ENST00000480104 TP63Q9H3D4 680 aaPredicted RBP11.34□□□□□ -0.59
USP11-208ENST00000480104 ADGRE2Q9UHX3 823 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 C3orf18Q9UK00 162 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 TMPRSS11EQ9UL52 423 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 HPSEQ9Y251 543 aa11.34□□□□□ -0.59
USP11-208ENST00000480104 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.34□□□□□ -0.59
USP11-208ENST00000480104 DNAJC13O75165 2243 aa11.33□□□□□ -0.59
USP11-208ENST00000480104 A0A1B0GTH9 108 aa11.33□□□□□ -0.6
USP11-208ENST00000480104 CCP110O43303 1012 aa11.33□□□□□ -0.6
USP11-208ENST00000480104 KCNJ13O60928 360 aa11.33□□□□□ -0.6
USP11-208ENST00000480104 MT-CYBP00156 380 aaPredicted RBP11.33□□□□□ -0.6
USP11-208ENST00000480104 SLC4A1P02730 911 aa11.33□□□□□ -0.6
USP11-208ENST00000480104 PIM1P11309 404 aaPredicted RBP11.33□□□□□ -0.6
USP11-208ENST00000480104 ERCC2P18074 760 aa11.33□□□□□ -0.6
USP11-208ENST00000480104 GPD1P21695 349 aa11.33□□□□□ -0.6
USP11-208ENST00000480104 ATP13A4Q4VNC1 1196 aa11.33□□□□□ -0.6
USP11-208ENST00000480104 SPESP1Q6UW49 350 aa11.33□□□□□ -0.6
USP11-208ENST00000480104 PAQR7Q86WK9 346 aa11.33□□□□□ -0.6
USP11-208ENST00000480104 METTL27Q8N6F8 245 aaPredicted RBP11.33□□□□□ -0.6
USP11-208ENST00000480104 DLG3Q92796 817 aa11.33□□□□□ -0.6
USP11-208ENST00000480104 RMDN2Q96LZ7 410 aa11.33□□□□□ -0.6
USP11-208ENST00000480104 PLA2G12AQ9BZM1 189 aa11.33□□□□□ -0.6
USP11-208ENST00000480104 NT5MQ9NPB1 228 aa11.33□□□□□ -0.6
USP11-208ENST00000480104 ANKRD10Q9NXR5 420 aa11.33□□□□□ -0.6
USP11-208ENST00000480104 ACTR10Q9NZ32 417 aa11.33□□□□□ -0.6
USP11-208ENST00000480104 IGHV1-45A0A0A0MS14 117 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 GTPBP10A4D1E9 387 aaKnown RBP11.32□□□□□ -0.6
USP11-208ENST00000480104 USP27XA6NNY8 438 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 C2orf74A8MZ97 194 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 DAPK3O43293 454 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 NDUFS1P28331 727 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 SYKP43405 635 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 OR1D4P47884 311 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 AIF1P55008 147 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 DMTNQ08495 405 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 TMEM115Q12893 351 aaPredicted RBP11.32□□□□□ -0.6
USP11-208ENST00000480104 TUBA3CQ13748 450 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 KRT33BQ14525 404 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 DAZAP2Q15038 168 aaPredicted RBP11.32□□□□□ -0.6
USP11-208ENST00000480104 OR1C1Q15619 314 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 CA9Q16790 459 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 COBLL1Q53SF7 1204 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 METRNLQ641Q3 311 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 TUBA3EQ6PEY2 450 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 PRSS57Q6UWY2 283 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 RFX8Q6ZV50 586 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 ACAD11Q709F0 780 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 GALNTL5Q7Z4T8 443 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 LIX1LQ8IVB5 337 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 FAM71AQ8IYT1 594 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 LRRC75A-AS1Q8N1F1 130 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 BEST3Q8N1M1 668 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 ACVR1CQ8NER5 493 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 SARGQ9BW04 601 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 SLC6A16Q9GZN6 736 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 RIC8BQ9NVN3 520 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 TEKT2Q9UIF3 430 aa11.32□□□□□ -0.6
USP11-208ENST00000480104 MAFKO60675 156 aa11.31□□□□□ -0.6
USP11-208ENST00000480104 SMPD2O60906 423 aa11.31□□□□□ -0.6
USP11-208ENST00000480104 SLC35G4P0C7Q5 338 aa11.31□□□□□ -0.6
USP11-208ENST00000480104 KRT3P12035 628 aa11.31□□□□□ -0.6
USP11-208ENST00000480104 UQCRC1P31930 480 aa11.31□□□□□ -0.6
USP11-208ENST00000480104 NDUFA8P51970 172 aa11.31□□□□□ -0.6
USP11-208ENST00000480104 STX17P56962 302 aa11.31□□□□□ -0.6
USP11-208ENST00000480104 DSC2Q02487 901 aa11.31□□□□□ -0.6
USP11-208ENST00000480104 QPCTQ16769 361 aa11.31□□□□□ -0.6
USP11-208ENST00000480104 EMC4Q5J8M3 183 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms