RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 STOML2Q9UJZ1 356 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 INVSQ9Y283 1065 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 PCDHB1Q9Y5F3 818 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 TNPO3Q9Y5L0 923 aaKnown RBP10.57□□□□□ -0.72
VPS52-217ENST00000478934 INSL5Q9Y5Q6 135 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 ANAPC1Q9H1A4 1944 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 MYO7AQ13402 2215 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 GFRA2O00451 464 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 MANBAO00462 879 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 AXIN1O15169 862 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 PRAMEF4O60810 478 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 PDYNP01213 254 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 SOD2P04179 222 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 ANXA6P08133 673 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 GGT1P19440 569 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 EFNA1P20827 205 aaPredicted RBP10.57□□□□□ -0.72
VPS52-217ENST00000478934 DGKAP23743 735 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 CDKN2CP42773 168 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 ADARB1P78563 741 aaKnown RBP10.57□□□□□ -0.72
VPS52-217ENST00000478934 MAPKAPK3Q16644 382 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 PRAMEF9Q5VWM5 478 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 SERPINA13PQ6UXR4 307 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 CERS6Q6ZMG9 384 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 NXPE1Q8N323 547 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 BEND7Q8N7W2 519 aaPredicted RBP10.57□□□□□ -0.72
VPS52-217ENST00000478934 OR2T12Q8NG77 320 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 TANKQ92844 425 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 ERLEC1Q96DZ1 483 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 DEFB118Q96PH6 123 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 TSSK3Q96PN8 268 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 OSBPL6Q9BZF3 934 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 ACPTQ9BZG2 426 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 TOR3AQ9H497 397 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 DNAAF2Q9NVR5 837 aaKnown RBP10.57□□□□□ -0.72
VPS52-217ENST00000478934 SLCO3A1Q9UIG8 710 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 TMPRSS11EQ9UL52 423 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 CCL26Q9Y258 94 aa10.57□□□□□ -0.72
VPS52-217ENST00000478934 ARNTLO00327 626 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 GSTA4O15217 222 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 TEX28O15482 410 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 HOXA2O43364 376 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 PRKD3O94806 890 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 PARNO95453 639 aaKnown RBP10.56□□□□□ -0.72
VPS52-217ENST00000478934 PGRP06401 933 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 MYCLP1P12525 358 aaPredicted RBP10.56□□□□□ -0.72
VPS52-217ENST00000478934 BCKDHAP12694 445 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 CDH1P12830 882 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 AGXTP21549 392 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 JAK1P23458 1154 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 RGS4P49798 205 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 AP1S1P61966 158 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 DEFB103AP81534 67 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 PTSQ03393 145 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 CYP4F3Q08477 520 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 SLC14A1Q13336 389 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 MEP1AQ16819 746 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 AASDHQ4L235 1098 aaPredicted RBP10.56□□□□□ -0.72
VPS52-217ENST00000478934 ASTLQ6HA08 431 aaPredicted RBP10.56□□□□□ -0.72
VPS52-217ENST00000478934 SLC22A17Q8WUG5 538 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 ULK4Q96C45 1275 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 CAPNS2Q96L46 248 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 BDH2Q9BUT1 245 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 C2orf49Q9BVC5 232 aaPredicted RBP10.56□□□□□ -0.72
VPS52-217ENST00000478934 DGCR6LQ9BY27 220 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 DPY30Q9C005 99 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 LRTM1Q9HBL6 345 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 ABCB8Q9NUT2 735 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 ARL15Q9NXU5 204 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 PKD2L2Q9NZM6 624 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 PDE10AQ9Y233 779 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 DGKBQ9Y6T7 804 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 TRBV5-4A0A0C4DH59 114 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 A0A1W2PRU2 124 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 K7EPI3 171 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 HNRNPCP07910 306 aaKnown RBP eCLIP10.56□□□□□ -0.72
VPS52-217ENST00000478934 FCGR1AP12314 374 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 ITPKAP23677 461 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 HOXD10P28358 340 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 GNPDA1P46926 289 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 ILF2Q12905 390 aaKnown RBP10.56□□□□□ -0.72
VPS52-217ENST00000478934 FXNQ16595 210 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 POM121L1PQ3SYA9 428 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 SPESP1Q6UW49 350 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 ZNF551Q7Z340 670 aaPredicted RBP10.56□□□□□ -0.72
VPS52-217ENST00000478934 R3HCC1LQ7Z5L2 792 aaKnown RBP10.56□□□□□ -0.72
VPS52-217ENST00000478934 PROSER1Q86XN7 944 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 CHST14Q8NCH0 376 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 ZNF548Q8NEK5 533 aaPredicted RBP10.56□□□□□ -0.72
VPS52-217ENST00000478934 NETO1Q8TDF5 533 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 FRS2Q8WU20 508 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 TRMT2BQ96GJ1 504 aaKnown RBP10.56□□□□□ -0.72
VPS52-217ENST00000478934 TMEM169Q96HH4 297 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 OR52E6Q96RD3 313 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 ATG10Q9H0Y0 220 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 ACTR8Q9H981 624 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 PFDN4Q9NQP4 134 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 HECAQ9UBI9 543 aaPredicted RBP10.56□□□□□ -0.72
VPS52-217ENST00000478934 ZNF639Q9UID6 485 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 DOLKQ9UPQ8 538 aa10.56□□□□□ -0.72
VPS52-217ENST00000478934 PCDHB14Q9Y5E9 798 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms