RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 IGHV4-38-2P0DP08 117 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 PFKFB1P16118 471 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 SLC9A3P48764 834 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 CDH11P55287 796 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 PRPF4BQ13523 1007 aaKnown RBP3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 KRTAP24-1Q3LI83 254 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 ZC2HC1CQ53FD0 456 aaPredicted RBP3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 CORO6Q6QEF8 472 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 CASC1Q6TDU7 716 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 RBMS3Q6XE24 437 aaKnown RBP3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 TMPRSS11FQ6ZWK6 438 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 ZNF554Q86TJ5 538 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 TRPT1Q86TN4 253 aaKnown RBP3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 FOXP4Q8IVH2 680 aaPredicted RBP3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 POGLUT1Q8NBL1 392 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 MSANTD4Q8NCY6 345 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 OR8H1Q8NGG4 311 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 OR5M8Q8NGP6 311 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 CFAP61Q8NHU2 1237 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 FCAMRQ8WWV6 532 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 ZNF524Q96C55 264 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 SLC47A1Q96FL8 570 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 MYADMQ96S97 322 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 OLFM1Q99784 485 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 RTP3Q9BQQ7 232 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 RHNO1Q9BSD3 238 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 BTBD10Q9BSF8 475 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 TRAF4Q9BUZ4 470 aaPredicted RBP3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 GOLPH3LQ9H4A5 285 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 OPA3Q9H6K4 179 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 TBC1D17Q9HA65 648 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 PELI2Q9HAT8 420 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 EQTNQ9NQ60 294 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 ADPRHL2Q9NX46 363 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 DPP3Q9NY33 737 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 TAB2Q9NYJ8 693 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 ANAPC2Q9UJX6 822 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 ZHX1Q9UKY1 873 aaPredicted RBP3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 TRPV2Q9Y5S1 764 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 FLT1P17948 1338 aa3.63□□□□□ -1.83
SMARCA1-204ENST00000478420 TCRBV21S2A2A0A5A6 115 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 PRR23AA6NEV1 266 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 BLOC1S5-TXNDC5H3BN57 136 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 MEIS2O14770 477 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 KRT86O43790 486 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 PCDH7O60245 1069 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 BAG2O95816 211 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 TSHBP01222 138 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 OR2T7P0C7T2 308 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 LIFP15018 202 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 ATP6V1B1P15313 513 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 SLC6A6P31641 620 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 TNNT3P45378 269 aaPredicted RBP3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 CAPZA2P47755 286 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 ZNF75DP51815 510 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 TPD52P55327 224 aaPredicted RBP3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 CX3CL1P78423 397 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 HSPB3Q12988 150 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 SNTB1Q13884 538 aaKnown RBP3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 KRT81Q14533 505 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 RASA2Q15283 850 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 TMEM266Q2M3C6 531 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 C9orf152Q5JTZ5 239 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 RNASEH2BQ5TBB1 312 aaKnown RBP3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 DNAJB7Q7Z6W7 309 aaPredicted RBP3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 COMMD2Q86X83 199 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 IQCA1Q86XH1 822 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 CEP57L1Q8IYX8 460 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 NAT8LQ8N9F0 302 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 MGARPQ8TDB4 240 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 SLAMF9Q96A28 289 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 NXNL1Q96CM4 212 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 JAKMIP1Q96N16 626 aaKnown RBP3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 GPATCH1Q9BRR8 931 aaKnown RBP3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 VN1R1Q9GZP7 353 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 WNT5BQ9H1J7 359 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 ZWILCHQ9H900 591 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 HAO2Q9NYQ3 351 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 ZNF624Q9P2J8 865 aaPredicted RBP3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 IL17BQ9UHF5 180 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 OSGIN1Q9UJX0 560 aa3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 PA2G4Q9UQ80 394 aaKnown RBP3.62□□□□□ -1.83
SMARCA1-204ENST00000478420 E9PI62 339 aa3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 PLOD2O00469 737 aa3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 GAPDHSO14556 408 aaPredicted RBP3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 HTATSF1O43719 755 aaKnown RBP3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 TGDSO95455 350 aa3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 TRUB2O95900 331 aaKnown RBP3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 LINGO3P0C6S8 592 aa3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 CCR3P51677 355 aa3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 ZNF131P52739 623 aa3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 PDX1P52945 283 aa3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 TUBB4BP68371 445 aa3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 LGALS3BPQ08380 585 aa3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 IL11RAQ14626 422 aa3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 C6orf163Q5TEZ5 329 aa3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 GFI1BQ5VTD9 330 aa3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 CAMKMTQ7Z624 323 aa3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 ISCA2Q86U28 154 aa3.61□□□□□ -1.83
SMARCA1-204ENST00000478420 ZNF595Q8IYB9 648 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms